Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | TK34_RS17730 | Genome accession | NZ_CP016380 |
| Coordinates | 3969923..3970243 (+) | Length | 106 a.a. |
| NCBI ID | WP_011707247.1 | Uniprot ID | A0AAX0XL99 |
| Organism | Aeromonas hydrophila strain AHNIH1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3964923..3975243
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TK34_RS17705 (TK34_17670) | trhA | 3965560..3966195 (-) | 636 | WP_065479271.1 | PAQR family membrane homeostasis protein TrhA | - |
| TK34_RS17710 (TK34_17675) | - | 3966420..3967925 (+) | 1506 | WP_065479274.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| TK34_RS17715 (TK34_17680) | - | 3968030..3968581 (+) | 552 | WP_024946223.1 | septation protein A | - |
| TK34_RS17720 (TK34_17685) | - | 3968607..3968903 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| TK34_RS17725 (TK34_17690) | cysQ | 3968984..3969754 (-) | 771 | WP_065479277.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| TK34_RS17730 (TK34_17695) | comEA | 3969923..3970243 (+) | 321 | WP_011707247.1 | ComEA family DNA-binding protein | Machinery gene |
| TK34_RS17735 (TK34_17700) | galU | 3970338..3971249 (+) | 912 | WP_017410998.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| TK34_RS17740 (TK34_17705) | - | 3971463..3972860 (+) | 1398 | WP_065479280.1 | peptide MFS transporter | - |
| TK34_RS17745 (TK34_17710) | - | 3972933..3973904 (-) | 972 | WP_017410997.1 | response regulator | - |
| TK34_RS17750 (TK34_17715) | - | 3974244..3974921 (+) | 678 | WP_029305297.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=187645 TK34_RS17730 WP_011707247.1 3969923..3970243(+) (comEA) [Aeromonas hydrophila strain AHNIH1]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=187645 TK34_RS17730 WP_011707247.1 3969923..3970243(+) (comEA) [Aeromonas hydrophila strain AHNIH1]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.939 |
92.453 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |