Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BAU10_RS13615 | Genome accession | NZ_CP016224 |
| Coordinates | 2983473..2984066 (-) | Length | 197 a.a. |
| NCBI ID | WP_042523672.1 | Uniprot ID | A0A7Y0R197 |
| Organism | Vibrio alginolyticus strain ZJ-T | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2978473..2989066
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAU10_RS13595 (BAU10_13595) | aroB | 2979358..2980458 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| BAU10_RS13600 (BAU10_13600) | aroK | 2980491..2981009 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| BAU10_RS13605 (BAU10_13605) | pilQ | 2981197..2982942 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| BAU10_RS13610 (BAU10_13610) | pilP | 2982968..2983483 (-) | 516 | WP_065274915.1 | pilus assembly protein PilP | Machinery gene |
| BAU10_RS13615 (BAU10_13615) | pilO | 2983473..2984066 (-) | 594 | WP_042523672.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BAU10_RS13620 (BAU10_13620) | pilN | 2984059..2984634 (-) | 576 | WP_054577259.1 | PilN domain-containing protein | Machinery gene |
| BAU10_RS13625 (BAU10_13625) | pilM | 2984618..2985634 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| BAU10_RS13630 (BAU10_13630) | - | 2985779..2988340 (+) | 2562 | WP_065274916.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 22999.53 Da Isoelectric Point: 5.0948
>NTDB_id=186370 BAU10_RS13615 WP_042523672.1 2983473..2984066(-) (pilO) [Vibrio alginolyticus strain ZJ-T]
MVDWQDLEIDEMAEWPLLPQIVVIVLLIMAIQGLGYWFYLKPKEEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEEAKNDK
MVDWQDLEIDEMAEWPLLPQIVVIVLLIMAIQGLGYWFYLKPKEEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEEAKNDK
Nucleotide
Download Length: 594 bp
>NTDB_id=186370 BAU10_RS13615 WP_042523672.1 2983473..2984066(-) (pilO) [Vibrio alginolyticus strain ZJ-T]
GTGGTTGATTGGCAGGATCTCGAAATCGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGTACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGAAGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTTC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCGATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGGCGAAAAATGACAAGTAA
GTGGTTGATTGGCAGGATCTCGAAATCGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGTACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGAAGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTTC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCGATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGGCGAAAAATGACAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
87.895 |
96.447 |
0.848 |
| pilO | Vibrio cholerae strain A1552 |
70.681 |
96.954 |
0.685 |