Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   A361_RS07460 Genome accession   NZ_CP015506
Coordinates   1459641..1460600 (+) Length   319 a.a.
NCBI ID   WP_019381479.1    Uniprot ID   A0A160M8J1
Organism   Cytobacillus oceanisediminis 2691     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454641..1465600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A361_RS07440 (A361_07440) clpB 1454797..1457394 (+) 2598 WP_019381476.1 ATP-dependent chaperone ClpB -
  A361_RS07445 (A361_07445) - 1457464..1457655 (-) 192 WP_009331232.1 DUF2929 family protein -
  A361_RS07450 (A361_07450) - 1457870..1458607 (+) 738 WP_019381477.1 serine aminopeptidase domain-containing protein -
  A361_RS07455 (A361_07455) - 1458689..1459522 (+) 834 WP_019381478.1 hypothetical protein -
  A361_RS07460 (A361_07460) med 1459641..1460600 (+) 960 WP_019381479.1 BMP family ABC transporter substrate-binding protein Regulator
  A361_RS07465 (A361_07465) comZ 1460627..1460821 (+) 195 WP_009331228.1 ComZ family protein Regulator
  A361_RS07475 (A361_07475) - 1461429..1462328 (+) 900 WP_236888003.1 nuclease-related domain-containing protein -
  A361_RS07480 (A361_07480) - 1462343..1462726 (-) 384 WP_009331226.1 hypothetical protein -
  A361_RS07485 (A361_07485) - 1462942..1463874 (+) 933 WP_009331225.1 beta-ketoacyl-ACP synthase III -
  A361_RS07490 (A361_07490) fabF 1463923..1465161 (+) 1239 WP_009331224.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35607.27 Da        Isoelectric Point: 4.4921

>NTDB_id=180152 A361_RS07460 WP_019381479.1 1459641..1460600(+) (med) [Cytobacillus oceanisediminis 2691]
MHKTLVKFGILLLCLLLLASCRQSMSTGKLEKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYNVEVYYKEGMNSEMVVERA
VKEFDQKGVNLIFGHGNEYAAYFNNISKKYPDIHFVSFNGDAKNDNTTSLNFEAYAMGFFGGMVAGHMTKTNNIGILAAF
EWQPEVEGFYQGVSEIDEGINVQIQYVGNWDNDNKAIALLDKMIANKTDVVYPAGDGYNVPVIEKLKEEGLYAIGYISDQ
SDLGESVVLTSTVQHVDVLYELVAKKFNEGELESGNLTFDFEDEVISLGKFSPDVDEEFKKELNAAIENYKKTGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=180152 A361_RS07460 WP_019381479.1 1459641..1460600(+) (med) [Cytobacillus oceanisediminis 2691]
ATGCATAAGACATTAGTGAAATTCGGGATCCTTCTTTTGTGCCTTCTTTTATTGGCCTCCTGCAGACAATCGATGTCTAC
AGGAAAACTTGAAAAAGCTGGATTATTAGTGCCCGATACCGTCAATGATCAGGTATGGGGGACGAAAGGCTATAAAGGCA
TGTTAAAGATTCAATCCCATTATAATGTGGAGGTTTATTATAAAGAGGGCATGAATTCTGAGATGGTTGTTGAAAGAGCT
GTTAAAGAGTTTGATCAAAAAGGTGTAAACCTGATTTTTGGACATGGCAATGAATACGCGGCATACTTTAATAACATTTC
AAAAAAATACCCTGACATTCATTTTGTCAGCTTTAATGGCGATGCCAAAAATGACAACACCACCAGCTTGAATTTTGAAG
CCTATGCAATGGGATTCTTTGGCGGCATGGTTGCTGGCCATATGACGAAAACCAATAACATAGGAATACTCGCAGCTTTT
GAATGGCAGCCGGAGGTAGAAGGTTTTTATCAAGGTGTAAGCGAAATTGATGAAGGTATAAACGTGCAAATCCAATATGT
CGGCAACTGGGACAATGATAATAAAGCCATAGCTCTCTTGGACAAAATGATTGCCAATAAGACAGATGTTGTCTATCCAG
CTGGAGATGGGTATAATGTTCCTGTCATCGAGAAACTAAAAGAGGAAGGGCTCTACGCCATCGGCTATATTTCCGACCAG
TCTGATCTGGGTGAATCAGTCGTCCTGACCAGTACGGTTCAGCATGTCGATGTTTTGTATGAACTAGTGGCAAAAAAATT
CAACGAAGGCGAACTGGAATCAGGAAATCTAACCTTTGATTTCGAGGATGAAGTTATTTCACTTGGGAAATTCAGCCCTG
ACGTCGACGAAGAATTCAAAAAAGAACTAAACGCTGCCATTGAGAATTACAAAAAAACAGGCAAACTGCCCAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A160M8J1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.035

98.119

0.52

Multiple sequence alignment