Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   BWQ98_RS11540 Genome accession   NZ_CP019299
Coordinates   1359539..1360261 (-) Length   240 a.a.
NCBI ID   WP_025173476.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1354539..1365261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS07200 (BWQ98_07210) - 1357113..1358279 (-) 1167 WP_050122646.1 MalY/PatB family protein -
  BWQ98_RS07205 (BWQ98_07215) - 1358287..1359381 (-) 1095 WP_000031966.1 cystathionine gamma-synthase -
  BWQ98_RS11540 rcrP 1359539..1360261 (-) 723 WP_025173476.1 ATP-binding cassette domain-containing protein Regulator
  BWQ98_RS11545 - 1360448..1360969 (-) 522 Protein_1369 ABC transporter transmembrane domain-containing protein -
  BWQ98_RS11550 - 1360966..1361220 (-) 255 WP_001860568.1 hypothetical protein -
  BWQ98_RS07215 (BWQ98_07225) amiA 1361392..1363350 (-) 1959 WP_127245069.1 peptide ABC transporter substrate-binding protein Regulator
  BWQ98_RS07220 (BWQ98_07230) - 1363553..1365175 (-) 1623 WP_024478395.1 polysaccharide biosynthesis protein -

Sequence


Protein


Download         Length: 240 a.a.        Molecular weight: 27299.19 Da        Isoelectric Point: 5.2119

>NTDB_id=179995 BWQ98_RS11540 WP_025173476.1 1359539..1360261(-) (rcrP) [Streptococcus pneumoniae strain HKU1-14]
MNFNHVYFGYDENRPVLKDITCSIFKGQKIAFVGPSGSGKSTIVRLLERFYKPLSGDILMEQSSIYDFNLKEWRSKIAWV
SQNNAVLSGSIRDNLCLGLNRLVTDDELMKVLDLVSLGDEIRSMKEGLDTEVGERGRFLSGGQSQRLQIARTYLKDAEIL
IFDEATANLDADSEYAIISILYSALKEKTVVIIAHRLSTVKDVDCIFFLEERKITGSGTHKELLENHERYARFVQEQMIE

Nucleotide


Download         Length: 723 bp        

>NTDB_id=179995 BWQ98_RS11540 WP_025173476.1 1359539..1360261(-) (rcrP) [Streptococcus pneumoniae strain HKU1-14]
TTGAATTTTAACCATGTTTATTTTGGTTATGATGAAAATCGACCTGTCTTAAAGGATATTACTTGTTCAATTTTCAAGGG
GCAAAAAATTGCTTTTGTTGGACCATCTGGATCAGGAAAATCAACGATTGTGCGTTTGTTAGAGCGGTTTTATAAACCGC
TTTCAGGAGATATTCTAATGGAGCAATCAAGTATATATGATTTTAACTTAAAAGAATGGAGAAGTAAAATCGCTTGGGTT
TCACAAAATAATGCAGTCTTATCTGGCAGTATTCGTGACAATCTTTGTCTCGGTTTGAATCGCTTAGTAACTGATGATGA
ATTGATGAAAGTGCTAGACTTAGTATCACTAGGTGATGAGATTCGCTCCATGAAAGAGGGACTAGATACTGAAGTTGGTG
AACGCGGACGATTCTTGTCAGGGGGGCAAAGCCAAAGACTTCAAATAGCTAGAACCTACTTAAAAGATGCTGAAATTCTT
ATATTTGATGAAGCCACTGCTAATCTTGATGCGGATTCTGAGTATGCGATTATCAGTATCCTCTATTCTGCATTAAAGGA
GAAGACGGTTGTGATTATAGCGCATCGTTTGTCAACGGTAAAAGATGTAGATTGTATTTTCTTCTTAGAGGAGAGGAAAA
TCACTGGCTCAGGAACTCATAAGGAACTACTGGAAAATCATGAGCGTTATGCTCGTTTTGTGCAGGAGCAAATGATAGAG
TGA

Domains


Predicted by InterProScan.

(17-167)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

36.402

99.583

0.363


Multiple sequence alignment