Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | Aba3207_RS09810 | Genome accession | NZ_CP015364 |
| Coordinates | 1994033..1994518 (-) | Length | 161 a.a. |
| NCBI ID | WP_000993726.1 | Uniprot ID | A0A242SN80 |
| Organism | Acinetobacter baumannii strain 3207 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1989033..1999518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba3207_RS09790 (Aba3207_09785) | - | 1990690..1991073 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| Aba3207_RS09795 (Aba3207_09790) | - | 1991283..1991477 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| Aba3207_RS09800 (Aba3207_09795) | bfr | 1991723..1992187 (+) | 465 | WP_000678123.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| Aba3207_RS09805 (Aba3207_09800) | - | 1992229..1993857 (-) | 1629 | WP_002015646.1 | PglL family O-oligosaccharyltransferase | - |
| Aba3207_RS09810 (Aba3207_09805) | pilA | 1994033..1994518 (-) | 486 | WP_000993726.1 | pilin | Machinery gene |
| Aba3207_RS09815 (Aba3207_09810) | - | 1994860..1995420 (-) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| Aba3207_RS09820 (Aba3207_09815) | - | 1995414..1996485 (-) | 1072 | Protein_1953 | TPM domain-containing protein | - |
| Aba3207_RS09825 (Aba3207_09820) | - | 1996520..1997110 (-) | 591 | Protein_1954 | LemA family protein | - |
| Aba3207_RS09830 (Aba3207_09825) | - | 1997465..1998132 (-) | 668 | Protein_1955 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16591.91 Da Isoelectric Point: 5.0937
>NTDB_id=178822 Aba3207_RS09810 WP_000993726.1 1994033..1994518(-) (pilA) [Acinetobacter baumannii strain 3207]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=178822 Aba3207_RS09810 WP_000993726.1 1994033..1994518(-) (pilA) [Acinetobacter baumannii strain 3207]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
45.86 |
97.516 |
0.447 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.558 |
95.652 |
0.398 |
| pilE | Neisseria gonorrhoeae MS11 |
37.736 |
98.758 |
0.373 |
| comP | Acinetobacter baylyi ADP1 |
36.709 |
98.137 |
0.36 |