Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | A4A60_RS13150 | Genome accession | NZ_CP015222 |
| Coordinates | 2465319..2465654 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain HRBS-10TDI13 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2460319..2470654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4A60_RS13130 (A4A60_13140) | gcvT | 2460912..2462000 (-) | 1089 | WP_017696204.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| A4A60_RS13135 (A4A60_13145) | hepAA | 2462441..2464114 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| A4A60_RS13140 (A4A60_13150) | yqhG | 2464135..2464929 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| A4A60_RS13145 (A4A60_13155) | sinI | 2465112..2465285 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| A4A60_RS13150 (A4A60_13160) | sinR | 2465319..2465654 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| A4A60_RS13155 (A4A60_13165) | tasA | 2465747..2466532 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| A4A60_RS13160 (A4A60_13170) | sipW | 2466596..2467168 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| A4A60_RS13165 (A4A60_13175) | tapA | 2467152..2467913 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| A4A60_RS13170 (A4A60_13180) | yqzG | 2468185..2468511 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| A4A60_RS13175 (A4A60_13185) | spoIITA | 2468553..2468732 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| A4A60_RS13180 (A4A60_13190) | comGG | 2468803..2469177 (-) | 375 | WP_069837632.1 | ComG operon protein ComGG | Machinery gene |
| A4A60_RS13185 (A4A60_13195) | comGF | 2469178..2469561 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| A4A60_RS13190 (A4A60_13200) | comGE | 2469587..2469934 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| A4A60_RS13195 (A4A60_13205) | comGD | 2469918..2470349 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| A4A60_RS13200 (A4A60_13210) | comGC | 2470339..2470635 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=177656 A4A60_RS13150 WP_003226345.1 2465319..2465654(+) (sinR) [Bacillus subtilis strain HRBS-10TDI13]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=177656 A4A60_RS13150 WP_003226345.1 2465319..2465654(+) (sinR) [Bacillus subtilis strain HRBS-10TDI13]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |