Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | A2G56_RS09880 | Genome accession | NZ_CP014835 |
| Coordinates | 2160485..2160760 (-) | Length | 91 a.a. |
| NCBI ID | WP_062712198.1 | Uniprot ID | - |
| Organism | Streptococcus halotolerans strain HTS9 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2155485..2165760
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2G56_RS09855 | - | 2156639..2156983 (+) | 345 | WP_062712187.1 | LytTR family DNA-binding domain-containing protein | - |
| A2G56_RS09860 | comE/blpR | 2156980..2157717 (+) | 738 | WP_062712190.1 | response regulator transcription factor | Regulator |
| A2G56_RS09865 | - | 2157729..2159060 (+) | 1332 | WP_237334414.1 | sensor histidine kinase | - |
| A2G56_RS10375 | - | 2159096..2159248 (-) | 153 | WP_082785140.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| A2G56_RS09870 | - | 2159439..2160020 (-) | 582 | WP_157761216.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| A2G56_RS10840 | - | 2160100..2160480 (-) | 381 | WP_062712196.1 | hypothetical protein | - |
| A2G56_RS09880 | comB | 2160485..2160760 (-) | 276 | WP_062712198.1 | hypothetical protein | Regulator |
| A2G56_RS09885 | comA/nlmT | 2160770..2162920 (-) | 2151 | WP_062712200.1 | peptide cleavage/export ABC transporter | Regulator |
| A2G56_RS09890 | - | 2163167..2163457 (+) | 291 | WP_237334415.1 | bacteriocin | - |
| A2G56_RS09895 | - | 2163468..2163686 (+) | 219 | WP_062712202.1 | Blp family class II bacteriocin | - |
| A2G56_RS09900 | - | 2163699..2163929 (+) | 231 | WP_062712205.1 | hypothetical protein | - |
| A2G56_RS09905 | - | 2163958..2164323 (+) | 366 | WP_062712208.1 | hypothetical protein | - |
| A2G56_RS11085 | - | 2164910..2165035 (+) | 126 | WP_018380421.1 | hypothetical protein | - |
| A2G56_RS11210 | - | 2165474..2165722 (+) | 249 | WP_418080418.1 | type II CAAX prenyl endopeptidase Rce1 family protein | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10324.08 Da Isoelectric Point: 10.2296
>NTDB_id=174508 A2G56_RS09880 WP_062712198.1 2160485..2160760(-) (comB) [Streptococcus halotolerans strain HTS9]
MNPNLFQSAEFYRRRYQNFATLLIYPLLLLVGFLGLFSLVAKKEISVSTIGEITPTSVIASIQSTSDNPLSSHHLEENKV
VKKRRCPPKLF
MNPNLFQSAEFYRRRYQNFATLLIYPLLLLVGFLGLFSLVAKKEISVSTIGEITPTSVIASIQSTSDNPLSSHHLEENKV
VKKRRCPPKLF
Nucleotide
Download Length: 276 bp
>NTDB_id=174508 A2G56_RS09880 WP_062712198.1 2160485..2160760(-) (comB) [Streptococcus halotolerans strain HTS9]
ATGAATCCGAATCTTTTTCAAAGTGCTGAATTTTACAGAAGACGCTACCAAAATTTTGCGACCTTACTGATTTACCCCTT
ACTCCTATTAGTTGGCTTCTTAGGACTCTTTTCTTTAGTAGCCAAGAAAGAAATTAGTGTTTCAACGATTGGTGAAATCA
CACCAACCAGTGTCATTGCCTCGATTCAATCAACTAGTGATAATCCCTTATCAAGTCATCACCTTGAGGAAAATAAAGTC
GTCAAAAAAAGACGATGTCCTCCTAAACTATTCTGA
ATGAATCCGAATCTTTTTCAAAGTGCTGAATTTTACAGAAGACGCTACCAAAATTTTGCGACCTTACTGATTTACCCCTT
ACTCCTATTAGTTGGCTTCTTAGGACTCTTTTCTTTAGTAGCCAAGAAAGAAATTAGTGTTTCAACGATTGGTGAAATCA
CACCAACCAGTGTCATTGCCTCGATTCAATCAACTAGTGATAATCCCTTATCAAGTCATCACCTTGAGGAAAATAAAGTC
GTCAAAAAAAGACGATGTCCTCCTAAACTATTCTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus mutans UA159 |
61.905 |
92.308 |
0.571 |
| comB/nlmE | Streptococcus mutans UA159 |
54.217 |
91.209 |
0.495 |
| comB | Streptococcus gordonii str. Challis substr. CH1 |
51.807 |
91.209 |
0.473 |
| comB | Streptococcus pneumoniae Rx1 |
51.807 |
91.209 |
0.473 |
| comB | Streptococcus pneumoniae D39 |
51.807 |
91.209 |
0.473 |
| comB | Streptococcus pneumoniae R6 |
51.807 |
91.209 |
0.473 |
| comB | Streptococcus pneumoniae TIGR4 |
51.807 |
91.209 |
0.473 |
| comB | Streptococcus mitis SK321 |
49.398 |
91.209 |
0.451 |
| comB | Streptococcus mitis NCTC 12261 |
49.398 |
91.209 |
0.451 |