Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SanJ4206_RS09810 Genome accession   NZ_CP012719
Coordinates   1999335..2000525 (+) Length   396 a.a.
NCBI ID   WP_003029517.1    Uniprot ID   A0AAI9J965
Organism   Streptococcus anginosus strain J4206     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1994335..2005525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS09770 (SanJ4206_1906c) - 1994841..1995674 (-) 834 WP_022525263.1 ISL3 family transposase -
  SanJ4206_RS09785 (SanJ4206_1907c) comE 1996143..1996892 (-) 750 WP_157622123.1 competence system response regulator transcription factor ComE Regulator
  SanJ4206_RS09790 (SanJ4206_1908c) comD/comD2 1996892..1998214 (-) 1323 WP_232202911.1 sensor histidine kinase Regulator
  SanJ4206_RS09795 (SanJ4206_1909c) - 1998235..1998381 (-) 147 WP_003029519.1 bacteriocin -
  SanJ4206_RS09805 (SanJ4206_1910c) rlmH 1998663..1999142 (-) 480 WP_003029518.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SanJ4206_RS09810 (SanJ4206_1911) htrA 1999335..2000525 (+) 1191 WP_003029517.1 S1C family serine protease Regulator
  SanJ4206_RS09815 (SanJ4206_1912) spo0J 2000580..2001347 (+) 768 WP_003029516.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41678.63 Da        Isoelectric Point: 9.4264

>NTDB_id=156806 SanJ4206_RS09810 WP_003029517.1 1999335..2000525(+) (htrA) [Streptococcus anginosus strain J4206]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIANNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=156806 SanJ4206_RS09810 WP_003029517.1 1999335..2000525(+) (htrA) [Streptococcus anginosus strain J4206]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATTGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTAAAAGATGCTGTTGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGTGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGGTCTGGAGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGCATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGCAAATTGACTGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCACTTGGTTCAAATTATGCTAATACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTCTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATTAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAACAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.81

100

0.768

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.216

99.242

0.548


Multiple sequence alignment