Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SanJ4206_RS09815 Genome accession   NZ_CP012719
Coordinates   2000580..2001347 (+) Length   255 a.a.
NCBI ID   WP_003029516.1    Uniprot ID   A0AAI9J817
Organism   Streptococcus anginosus strain J4206     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1995580..2006347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS09785 (SanJ4206_1907c) comE 1996143..1996892 (-) 750 WP_157622123.1 competence system response regulator transcription factor ComE Regulator
  SanJ4206_RS09790 (SanJ4206_1908c) comD/comD2 1996892..1998214 (-) 1323 WP_232202911.1 sensor histidine kinase Regulator
  SanJ4206_RS09795 (SanJ4206_1909c) - 1998235..1998381 (-) 147 WP_003029519.1 bacteriocin -
  SanJ4206_RS09805 (SanJ4206_1910c) rlmH 1998663..1999142 (-) 480 WP_003029518.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SanJ4206_RS09810 (SanJ4206_1911) htrA 1999335..2000525 (+) 1191 WP_003029517.1 S1C family serine protease Regulator
  SanJ4206_RS09815 (SanJ4206_1912) spo0J 2000580..2001347 (+) 768 WP_003029516.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29633.21 Da        Isoelectric Point: 9.3508

>NTDB_id=156807 SanJ4206_RS09815 WP_003029516.1 2000580..2001347(+) (spo0J) [Streptococcus anginosus strain J4206]
MEKYQYIALKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPSNIIEAVKEGNISQGHA
RLLINLSEKDQIHWFEKILSQELSVRKLEKQLHPKRTKTVTKDKNQLFIKEEEERLKKIFGTDISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=156807 SanJ4206_RS09815 WP_003029516.1 2000580..2001347(+) (spo0J) [Streptococcus anginosus strain J4206]
ATGGAAAAATATCAATATATTGCACTTAAGGACATTCAAACTAATCCTTACCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAGCTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATTATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCTATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAGGGATTGACACACAAAGAAATCGCTCTAACAATGGGAAAATCTCGCCCTTACATTA
CAAATTCTGTTCGTTTATTAAACTTACCATCCAATATCATTGAAGCAGTAAAAGAAGGAAATATCTCTCAAGGACATGCT
CGCCTGCTTATCAATCTCTCAGAAAAAGATCAAATTCACTGGTTTGAAAAAATTCTATCTCAAGAACTTTCAGTTAGAAA
ACTAGAAAAACAATTGCACCCAAAACGAACAAAAACTGTAACAAAAGATAAAAATCAACTTTTTATCAAAGAAGAAGAAG
AAAGGTTAAAAAAGATATTCGGTACAGATATTTCACTCCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.918

100

0.533


Multiple sequence alignment