Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FORC24_RS18965 Genome accession   NZ_CP012691
Coordinates   3788472..3789710 (-) Length   412 a.a.
NCBI ID   WP_069358191.1    Uniprot ID   -
Organism   Bacillus cereus strain FORC_024     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3783472..3794710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC24_RS18945 (FORC24_3579) spoVS 3783885..3784145 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  FORC24_RS18950 (FORC24_3580) - 3784295..3785089 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  FORC24_RS18955 (FORC24_3581) rny 3785252..3786814 (-) 1563 WP_000204911.1 ribonuclease Y -
  FORC24_RS18960 (FORC24_3582) recA 3787297..3788328 (-) 1032 WP_001283860.1 recombinase RecA Machinery gene
  FORC24_RS18965 (FORC24_3583) cinA 3788472..3789710 (-) 1239 WP_069358191.1 competence/damage-inducible protein A Machinery gene
  FORC24_RS18970 (FORC24_3584) pgsA 3789731..3790309 (-) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FORC24_RS18975 (FORC24_3585) - 3790374..3791285 (-) 912 WP_000137461.1 RodZ domain-containing protein -
  FORC24_RS18980 (FORC24_3586) - 3791307..3792092 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  FORC24_RS18985 (FORC24_3587) - 3792231..3792479 (-) 249 WP_000114450.1 DUF3243 domain-containing protein -
  FORC24_RS18990 (FORC24_3588) - 3792555..3793268 (-) 714 WP_000759604.1 SDR family oxidoreductase -
  FORC24_RS18995 (FORC24_3589) - 3793369..3794655 (-) 1287 WP_000411976.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45519.86 Da        Isoelectric Point: 5.2258

>NTDB_id=156489 FORC24_RS18965 WP_069358191.1 3788472..3789710(-) (cinA) [Bacillus cereus strain FORC_024]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVIGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IAASLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQYVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIRERTAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=156489 FORC24_RS18965 WP_069358191.1 3788472..3789710(-) (cinA) [Bacillus cereus strain FORC_024]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTATTGGTGATAATAATAAGCGATTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTTACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAAGAAACG
ATAGCTGCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCGGGTATGGGGGTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGCAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATTGCCCCGTTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTGTTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAATATGTTTTACGTGTGCCTGAAGAAGTG
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTACTAAAAGCGGATAT
TGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCGA
TTAAGGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.01

100

0.58
  cinA Streptococcus pneumoniae TIGR4

46.539

100

0.473
  cinA Streptococcus mitis SK321

46.301

100

0.471
  cinA Streptococcus pneumoniae Rx1

46.062

100

0.468
  cinA Streptococcus pneumoniae R6

46.062

100

0.468
  cinA Streptococcus pneumoniae D39

45.823

100

0.466
  cinA Streptococcus mitis NCTC 12261

45.823

100

0.466
  cinA Streptococcus mutans UA159

45.729

96.602

0.442
  cinA Streptococcus suis isolate S10

40.053

91.505

0.367

Multiple sequence alignment