Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | WX61_RS15820 | Genome accession | NZ_CP012028 |
| Coordinates | 814010..814321 (+) | Length | 103 a.a. |
| NCBI ID | WP_200899946.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 35/02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 809010..819321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WX61_RS14815 | - | 809156..809535 (+) | 380 | Protein_806 | pilin | - |
| WX61_RS15265 | - | 809554..809895 (+) | 342 | Protein_807 | pilin | - |
| WX61_RS15270 | - | 810429..810812 (+) | 384 | Protein_808 | pilin | - |
| WX61_RS14820 | - | 810852..811211 (+) | 360 | Protein_809 | pilin | - |
| WX61_RS04300 (WX61_00832) | lpxC | 811704..812627 (+) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| WX61_RS04305 (WX61_00833) | - | 812772..813152 (+) | 381 | Protein_811 | pilin | - |
| WX61_RS04310 | - | 813498..813641 (+) | 144 | WP_003691943.1 | hypothetical protein | - |
| WX61_RS15820 (WX61_00834) | pilE | 814010..814321 (+) | 312 | WP_200899946.1 | pilin | Machinery gene |
| WX61_RS15825 | pilE | 814246..814509 (+) | 264 | WP_407716437.1 | pilin | Machinery gene |
| WX61_RS04325 (WX61_00835) | - | 814979..815743 (+) | 765 | Protein_815 | opacity family porin | - |
| WX61_RS04330 (WX61_00836) | pilA | 816007..817260 (-) | 1254 | WP_003691946.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| WX61_RS04335 (WX61_00837) | msrAB | 817406..818974 (+) | 1569 | WP_003687002.1 | bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 10876.65 Da Isoelectric Point: 9.5045
>NTDB_id=150670 WX61_RS15820 WP_200899946.1 814010..814321(+) (pilE) [Neisseria gonorrhoeae strain 35/02]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTGYYLNHGTWPKDNTSAGVASPPPTS
KANMLKALRSQTASLPPKCFQAA
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTGYYLNHGTWPKDNTSAGVASPPPTS
KANMLKALRSQTASLPPKCFQAA
Nucleotide
Download Length: 312 bp
>NTDB_id=150670 WX61_RS15820 WP_200899946.1 814010..814321(+) (pilE) [Neisseria gonorrhoeae strain 35/02]
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCTATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCCGCCTACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGGGTATTACCTGAATCACGGCACATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCCCCCCTCCAACATCA
AAGGCAAATATGTTGAAAGCGTTACGGTCACAAACGGCGTCGTTACCGCCAAAATGCTTTCAAGCGGCGTAA
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCTATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCCGCCTACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGGGTATTACCTGAATCACGGCACATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCCCCCCTCCAACATCA
AAGGCAAATATGTTGAAAGCGTTACGGTCACAAACGGCGTCGTTACCGCCAAAATGCTTTCAAGCGGCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
84.27 |
86.408 |
0.728 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
97.333 |
72.816 |
0.709 |
| pilA/pilA1 | Eikenella corrodens VA1 |
50.575 |
84.466 |
0.427 |
| pilA2 | Legionella pneumophila str. Paris |
54.667 |
72.816 |
0.398 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.667 |
72.816 |
0.398 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
64.516 |
60.194 |
0.388 |
| comP | Acinetobacter baylyi ADP1 |
65.517 |
56.311 |
0.369 |