Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | SB45_RS08220 | Genome accession | NZ_CP010556 |
| Coordinates | 1664659..1665909 (+) | Length | 416 a.a. |
| NCBI ID | WP_043867100.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain L-H15 | ||
| Function | unknown (predicted from homology) Unclear |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1645575..1702654 | 1664659..1665909 | within | 0 |
Gene organization within MGE regions
Location: 1645575..1702654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SB45_RS08140 (SB45_08140) | dapA | 1646181..1647050 (+) | 870 | WP_003154166.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| SB45_RS08145 (SB45_08145) | rnjB | 1647229..1648896 (+) | 1668 | WP_003154163.1 | ribonuclease J2 | - |
| SB45_RS08150 (SB45_08150) | - | 1649012..1649749 (+) | 738 | WP_003154162.1 | ClpP family protease | - |
| SB45_RS08155 (SB45_08155) | - | 1649746..1649955 (+) | 210 | WP_003154161.1 | YlzJ-like family protein | - |
| SB45_RS08160 (SB45_08160) | - | 1650090..1652450 (+) | 2361 | WP_015388225.1 | DNA translocase FtsK | - |
| SB45_RS08165 (SB45_08165) | - | 1652575..1653300 (+) | 726 | WP_003154159.1 | GntR family transcriptional regulator | - |
| SB45_RS08170 (SB45_08170) | - | 1653412..1654641 (+) | 1230 | WP_003154158.1 | MFS transporter | - |
| SB45_RS08175 (SB45_08175) | - | 1654748..1655203 (+) | 456 | WP_003154157.1 | MarR family transcriptional regulator | - |
| SB45_RS08180 (SB45_08180) | - | 1655203..1658322 (+) | 3120 | WP_043867097.1 | MMPL family transporter | - |
| SB45_RS08185 (SB45_08185) | - | 1658474..1659754 (+) | 1281 | WP_014305019.1 | pitrilysin family protein | - |
| SB45_RS08190 (SB45_08190) | - | 1659751..1661037 (+) | 1287 | WP_025851236.1 | pitrilysin family protein | - |
| SB45_RS08195 (SB45_08195) | - | 1661096..1661824 (+) | 729 | WP_043867098.1 | SDR family oxidoreductase | - |
| SB45_RS08200 (SB45_08200) | - | 1661900..1662157 (+) | 258 | WP_003154150.1 | DUF3243 domain-containing protein | - |
| SB45_RS08205 (SB45_08205) | - | 1662285..1663076 (+) | 792 | WP_003154149.1 | YmfK family protein | - |
| SB45_RS08210 (SB45_08210) | - | 1663095..1663985 (+) | 891 | WP_043867099.1 | RodZ domain-containing protein | - |
| SB45_RS08215 (SB45_08215) | pgsA | 1664060..1664641 (+) | 582 | WP_003154147.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| SB45_RS08220 (SB45_08220) | cinA | 1664659..1665909 (+) | 1251 | WP_043867100.1 | competence/damage-inducible protein A | Machinery gene |
| SB45_RS08225 (SB45_08225) | recA | 1666080..1667123 (+) | 1044 | WP_003154145.1 | recombinase RecA | Machinery gene |
| SB45_RS08230 (SB45_08230) | - | 1667292..1668473 (+) | 1182 | WP_003154142.1 | serine hydrolase domain-containing protein | - |
| SB45_RS08235 (SB45_08235) | rny | 1668766..1670325 (+) | 1560 | WP_003154140.1 | ribonuclease Y | - |
| SB45_RS08240 (SB45_08240) | - | 1670386..1671180 (+) | 795 | WP_003154137.1 | TIGR00282 family metallophosphoesterase | - |
| SB45_RS08245 (SB45_08245) | spoVS | 1671380..1671640 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| SB45_RS08250 (SB45_08250) | tdh | 1671899..1672945 (+) | 1047 | WP_043867101.1 | L-threonine 3-dehydrogenase | - |
| SB45_RS08255 (SB45_08255) | - | 1672958..1674136 (+) | 1179 | WP_088037143.1 | glycine C-acetyltransferase | - |
| SB45_RS08260 (SB45_08260) | miaB | 1674279..1675808 (+) | 1530 | WP_003154116.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| SB45_RS08265 (SB45_08265) | - | 1675811..1676242 (+) | 432 | WP_003154113.1 | RicAFT regulatory complex protein RicA family protein | - |
| SB45_RS08270 (SB45_08270) | cotE | 1676496..1677041 (+) | 546 | WP_003154111.1 | outer spore coat protein CotE | - |
| SB45_RS08275 (SB45_08275) | mutS | 1677160..1679745 (+) | 2586 | WP_003154108.1 | DNA mismatch repair protein MutS | - |
| SB45_RS08280 (SB45_08280) | mutL | 1679761..1681638 (+) | 1878 | WP_003154106.1 | DNA mismatch repair endonuclease MutL | - |
| SB45_RS08285 (SB45_08285) | - | 1681691..1682806 (-) | 1116 | WP_043867102.1 | site-specific integrase | - |
| SB45_RS08290 (SB45_08290) | - | 1683107..1684288 (+) | 1182 | WP_043867633.1 | AimR family lysis-lysogeny pheromone receptor | - |
| SB45_RS08295 (SB45_08295) | - | 1684660..1685049 (-) | 390 | WP_043867103.1 | helix-turn-helix transcriptional regulator | - |
| SB45_RS08305 (SB45_08305) | - | 1685490..1685807 (+) | 318 | WP_043867105.1 | hypothetical protein | - |
| SB45_RS08310 (SB45_08310) | - | 1685820..1686044 (+) | 225 | WP_043867106.1 | hypothetical protein | - |
| SB45_RS08315 (SB45_08315) | - | 1686031..1686903 (+) | 873 | WP_043867107.1 | phage replisome organizer N-terminal domain-containing protein | - |
| SB45_RS08320 (SB45_08320) | - | 1686830..1687720 (+) | 891 | WP_240903262.1 | ATP-binding protein | - |
| SB45_RS19815 | - | 1687735..1687884 (+) | 150 | WP_017417259.1 | hypothetical protein | - |
| SB45_RS19820 | - | 1687881..1688039 (+) | 159 | WP_163104070.1 | hypothetical protein | - |
| SB45_RS08325 (SB45_08325) | - | 1688036..1688584 (+) | 549 | WP_043867108.1 | hypothetical protein | - |
| SB45_RS19825 | - | 1688553..1688720 (+) | 168 | WP_163104071.1 | hypothetical protein | - |
| SB45_RS19630 | - | 1688693..1688833 (+) | 141 | WP_015387918.1 | BH0509 family protein | - |
| SB45_RS19830 | - | 1688846..1689001 (+) | 156 | WP_163104072.1 | hypothetical protein | - |
| SB45_RS08330 (SB45_08330) | - | 1689081..1689284 (+) | 204 | WP_014721584.1 | XtrA/YqaO family protein | - |
| SB45_RS08335 (SB45_08335) | - | 1689425..1689805 (+) | 381 | WP_043867109.1 | hypothetical protein | - |
| SB45_RS08340 (SB45_08340) | - | 1689802..1690179 (+) | 378 | WP_043867110.1 | YopX family protein | - |
| SB45_RS08350 (SB45_08350) | - | 1690400..1690657 (+) | 258 | WP_043867112.1 | hypothetical protein | - |
| SB45_RS08355 (SB45_08355) | - | 1690662..1691486 (+) | 825 | WP_043867113.1 | DNA adenine methylase | - |
| SB45_RS08360 (SB45_08360) | - | 1691483..1692322 (+) | 840 | WP_043867114.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SB45_RS08365 (SB45_08365) | - | 1692404..1692817 (+) | 414 | WP_043867115.1 | hypothetical protein | - |
| SB45_RS08370 (SB45_08370) | - | 1692961..1693311 (-) | 351 | WP_017417491.1 | Ig-like domain-containing protein | - |
| SB45_RS08375 (SB45_08375) | - | 1693420..1693854 (+) | 435 | WP_043867116.1 | hypothetical protein | - |
| SB45_RS19835 | - | 1693960..1694136 (+) | 177 | WP_163104073.1 | hypothetical protein | - |
| SB45_RS08380 (SB45_08380) | - | 1694191..1694643 (+) | 453 | WP_043867635.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| SB45_RS08385 (SB45_08385) | - | 1694640..1695182 (+) | 543 | WP_038458303.1 | tyrosine-type recombinase/integrase | - |
| SB45_RS08390 (SB45_08390) | - | 1695411..1696673 (+) | 1263 | WP_043867117.1 | hypothetical protein | - |
| SB45_RS08395 (SB45_08395) | - | 1696963..1697256 (+) | 294 | WP_043867118.1 | hypothetical protein | - |
| SB45_RS08400 (SB45_08400) | - | 1697324..1698217 (+) | 894 | WP_043867119.1 | hypothetical protein | - |
| SB45_RS08405 (SB45_08405) | - | 1698323..1698679 (+) | 357 | WP_046376718.1 | hypothetical protein | - |
| SB45_RS08410 (SB45_08410) | - | 1698697..1699992 (+) | 1296 | WP_043867120.1 | PIN domain-containing protein | - |
| SB45_RS19155 (SB45_08415) | - | 1700041..1700406 (+) | 366 | WP_043867121.1 | HNH endonuclease | - |
| SB45_RS08420 (SB45_08420) | - | 1700634..1701149 (+) | 516 | WP_014418488.1 | phage terminase small subunit P27 family | - |
Sequence
Protein
Download Length: 416 a.a. Molecular weight: 45106.44 Da Isoelectric Point: 5.3789
>NTDB_id=139255 SB45_RS08220 WP_043867100.1 1664659..1665909(+) (cinA) [Bacillus velezensis strain L-H15]
MEIAKKAEIIAVGSELLLGQIANTNAQFISKELAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDLIIFSGGLGPTKDDL
TKETIANTLGRPLVLNDEAFRSIEEYFAKTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLAEHGSRLYMLLPGPPSEL
RPMFENEAKPLLLKKLGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAAILERVGEFFYGYDDTSLVKELSKACRQNKITISSAESFTGGLFSEWVTDLSGASQLFAGGVVCYSDSVKQHVLG
VKAETLAESGAVSKECAKELAAGVRKLTGSDIGISFTGVAGPDPQEGHAPGRVFIGISAEGKEEVHEFHFAGSRTGIRKR
AAKYGCHLILKMLDQK
MEIAKKAEIIAVGSELLLGQIANTNAQFISKELAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDLIIFSGGLGPTKDDL
TKETIANTLGRPLVLNDEAFRSIEEYFAKTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLAEHGSRLYMLLPGPPSEL
RPMFENEAKPLLLKKLGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAAILERVGEFFYGYDDTSLVKELSKACRQNKITISSAESFTGGLFSEWVTDLSGASQLFAGGVVCYSDSVKQHVLG
VKAETLAESGAVSKECAKELAAGVRKLTGSDIGISFTGVAGPDPQEGHAPGRVFIGISAEGKEEVHEFHFAGSRTGIRKR
AAKYGCHLILKMLDQK
Nucleotide
Download Length: 1251 bp
>NTDB_id=139255 SB45_RS08220 WP_043867100.1 1664659..1665909(+) (cinA) [Bacillus velezensis strain L-H15]
ATGGAAATAGCAAAAAAAGCAGAAATCATTGCGGTCGGCTCGGAGCTTCTGCTCGGCCAGATCGCCAATACGAACGCGCA
GTTTATCAGTAAAGAGCTGGCGGAAATCGGTGTAAACGTGTTTTACCATACCGCTGTCGGTGACAATCCGGAGCGGCTTA
AGCAAGTCATCCGCATTGCCGAAGAGCGCTCAGACCTGATTATTTTTTCAGGCGGTCTCGGACCGACCAAGGACGATTTG
ACGAAAGAAACCATTGCAAACACACTGGGGCGCCCGCTCGTTCTGAATGACGAAGCGTTCCGGTCGATCGAAGAATATTT
CGCGAAAACAAAACGGACCATGTCGCCGAATAACCGCAAACAGGCGCTCGTCATTGAGGGCTCGGACGTTTTGGCGAATC
ATTTCGGTATGGCACCGGGAATGCTTGCAGAGCACGGCTCAAGGCTTTATATGCTGCTTCCCGGGCCGCCGAGCGAGCTG
CGTCCGATGTTTGAAAATGAAGCGAAACCGCTGCTTCTTAAAAAGCTTGGTTCTAATGAGAAAATCGTTTCAACCGTGCT
GCGGTTTTTCGGAATCGGTGAATCCCAGCTTGAAGCTGATTTAGAAGATATCATTGACGCGCAGACGAATCCGACGATTG
CGCCGCTTGCTGCTGACGGCGAGGTCACGCTGCGTTTAACGGCGAAACATGCTGACGAAAAAGAAACAGAACGGCTTTTA
AAAGAAACGGAAGCCGCCATTTTAGAACGTGTCGGTGAATTTTTCTACGGATATGATGATACGTCCCTGGTGAAGGAGCT
TTCAAAAGCATGCAGACAAAACAAAATCACGATTTCTTCTGCCGAAAGCTTTACAGGCGGCCTGTTTTCAGAGTGGGTGA
CTGATTTAAGCGGTGCGTCTCAACTATTTGCAGGAGGCGTTGTCTGCTATTCCGACAGCGTGAAACAGCATGTGCTCGGC
GTGAAAGCTGAGACGCTCGCAGAAAGCGGAGCGGTCAGCAAAGAGTGTGCGAAAGAGCTTGCAGCCGGTGTGAGAAAGCT
GACCGGAAGCGATATCGGCATCAGCTTTACCGGGGTCGCGGGTCCCGACCCGCAGGAAGGGCATGCGCCGGGCCGCGTCT
TTATCGGCATTTCAGCGGAAGGAAAAGAAGAGGTGCACGAATTTCACTTTGCCGGCTCAAGAACCGGAATCAGAAAGCGC
GCCGCTAAATACGGCTGCCATCTCATTTTAAAAATGCTGGATCAAAAATAA
ATGGAAATAGCAAAAAAAGCAGAAATCATTGCGGTCGGCTCGGAGCTTCTGCTCGGCCAGATCGCCAATACGAACGCGCA
GTTTATCAGTAAAGAGCTGGCGGAAATCGGTGTAAACGTGTTTTACCATACCGCTGTCGGTGACAATCCGGAGCGGCTTA
AGCAAGTCATCCGCATTGCCGAAGAGCGCTCAGACCTGATTATTTTTTCAGGCGGTCTCGGACCGACCAAGGACGATTTG
ACGAAAGAAACCATTGCAAACACACTGGGGCGCCCGCTCGTTCTGAATGACGAAGCGTTCCGGTCGATCGAAGAATATTT
CGCGAAAACAAAACGGACCATGTCGCCGAATAACCGCAAACAGGCGCTCGTCATTGAGGGCTCGGACGTTTTGGCGAATC
ATTTCGGTATGGCACCGGGAATGCTTGCAGAGCACGGCTCAAGGCTTTATATGCTGCTTCCCGGGCCGCCGAGCGAGCTG
CGTCCGATGTTTGAAAATGAAGCGAAACCGCTGCTTCTTAAAAAGCTTGGTTCTAATGAGAAAATCGTTTCAACCGTGCT
GCGGTTTTTCGGAATCGGTGAATCCCAGCTTGAAGCTGATTTAGAAGATATCATTGACGCGCAGACGAATCCGACGATTG
CGCCGCTTGCTGCTGACGGCGAGGTCACGCTGCGTTTAACGGCGAAACATGCTGACGAAAAAGAAACAGAACGGCTTTTA
AAAGAAACGGAAGCCGCCATTTTAGAACGTGTCGGTGAATTTTTCTACGGATATGATGATACGTCCCTGGTGAAGGAGCT
TTCAAAAGCATGCAGACAAAACAAAATCACGATTTCTTCTGCCGAAAGCTTTACAGGCGGCCTGTTTTCAGAGTGGGTGA
CTGATTTAAGCGGTGCGTCTCAACTATTTGCAGGAGGCGTTGTCTGCTATTCCGACAGCGTGAAACAGCATGTGCTCGGC
GTGAAAGCTGAGACGCTCGCAGAAAGCGGAGCGGTCAGCAAAGAGTGTGCGAAAGAGCTTGCAGCCGGTGTGAGAAAGCT
GACCGGAAGCGATATCGGCATCAGCTTTACCGGGGTCGCGGGTCCCGACCCGCAGGAAGGGCATGCGCCGGGCCGCGTCT
TTATCGGCATTTCAGCGGAAGGAAAAGAAGAGGTGCACGAATTTCACTTTGCCGGCTCAAGAACCGGAATCAGAAAGCGC
GCCGCTAAATACGGCTGCCATCTCATTTTAAAAATGCTGGATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
90.385 |
100 |
0.904 |
| cinA | Streptococcus mitis NCTC 12261 |
47.368 |
100 |
0.476 |
| cinA | Streptococcus mitis SK321 |
46.89 |
100 |
0.471 |
| cinA | Streptococcus pneumoniae TIGR4 |
46.411 |
100 |
0.466 |
| cinA | Streptococcus pneumoniae Rx1 |
46.411 |
100 |
0.466 |
| cinA | Streptococcus pneumoniae R6 |
46.411 |
100 |
0.466 |
| cinA | Streptococcus pneumoniae D39 |
46.172 |
100 |
0.464 |
| cinA | Streptococcus mutans UA159 |
46.247 |
99.279 |
0.459 |
| cinA | Streptococcus suis isolate S10 |
40.921 |
93.99 |
0.385 |