Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FORC10_RS00435 Genome accession   NZ_CP010272
Coordinates   74825..76063 (+) Length   412 a.a.
NCBI ID   WP_106919005.1    Uniprot ID   -
Organism   Bacillus cereus strain FORC_010     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 69825..81063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC10_RS00405 (FORC10_0079) - 69880..71166 (+) 1287 WP_000411980.1 pitrilysin family protein -
  FORC10_RS00410 (FORC10_0080) - 71267..71980 (+) 714 WP_000759604.1 SDR family oxidoreductase -
  FORC10_RS00415 (FORC10_0081) - 72056..72304 (+) 249 WP_000114450.1 DUF3243 domain-containing protein -
  FORC10_RS00420 (FORC10_0082) - 72443..73228 (+) 786 WP_000574107.1 DUF3388 domain-containing protein -
  FORC10_RS00425 (FORC10_0083) - 73250..74161 (+) 912 WP_000137461.1 RodZ domain-containing protein -
  FORC10_RS00430 (FORC10_0084) pgsA 74226..74804 (+) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FORC10_RS00435 (FORC10_0085) cinA 74825..76063 (+) 1239 WP_106919005.1 competence/damage-inducible protein A Machinery gene
  FORC10_RS00440 (FORC10_0086) recA 76207..77238 (+) 1032 WP_001283860.1 recombinase RecA Machinery gene
  FORC10_RS00445 (FORC10_0087) rny 77721..79283 (+) 1563 WP_000204911.1 ribonuclease Y -
  FORC10_RS00450 (FORC10_0088) - 79446..80240 (+) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  FORC10_RS00455 (FORC10_0089) spoVS 80390..80650 (+) 261 WP_000404341.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45547.92 Da        Isoelectric Point: 5.2258

>NTDB_id=135630 FORC10_RS00435 WP_106919005.1 74825..76063(+) (cinA) [Bacillus cereus strain FORC_010]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IATSLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQYVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPIVVFPLNLSGSRQQIRERTAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=135630 FORC10_RS00435 WP_106919005.1 74825..76063(+) (cinA) [Bacillus cereus strain FORC_010]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGATTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAAGAAACG
ATAGCTACTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCGGGTATGGGGGTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGGCCACCAAAAGAGATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATTGCCCCATTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAATATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTGTTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTG
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTACTAAAAGCGGATAT
CGGAATTAGTTTCACTGGTGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCTA
TTAAGGATGAACCAATTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(258-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.252

100

0.583
  cinA Streptococcus pneumoniae TIGR4

46.539

100

0.473
  cinA Streptococcus mitis SK321

46.301

100

0.471
  cinA Streptococcus pneumoniae Rx1

46.062

100

0.468
  cinA Streptococcus pneumoniae R6

46.062

100

0.468
  cinA Streptococcus pneumoniae D39

45.823

100

0.466
  cinA Streptococcus mitis NCTC 12261

45.823

100

0.466
  cinA Streptococcus mutans UA159

45.98

96.602

0.444
  cinA Streptococcus suis isolate S10

40.584

91.505

0.371

Multiple sequence alignment