Detailed information NTG0129639

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LG36_RS06185
• Genome accession: NZ_CP009472
• Coordinates: 1283497..1284345 (-)
• Length: 282 a.a.
• NCBI ID: WP_038600928.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain AI06
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1278497..1289345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG36_RS06170 (LG36_1167)	xerS	1278573..1279643 (+)	1071	WP_038600916.1	tyrosine recombinase XerS	-
LG36_RS06175 (LG36_1168)	trmFO	1279688..1281031 (-)	1344	WP_038600918.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LG36_RS06180 (LG36_1169)	topA	1281103..1283235 (-)	2133	WP_038600921.1	type I DNA topoisomerase	-
LG36_RS06185 (LG36_1170)	dprA	1283497..1284345 (-)	849	WP_038600928.1	DNA-processing protein DprA	Machinery gene
LG36_RS06190 (LG36_1171)	-	1284491..1284871 (-)	381	WP_038600930.1	RidA family protein	-
LG36_RS06195 (LG36_1172)	budA	1284912..1285622 (-)	711	WP_038600933.1	acetolactate decarboxylase	-
LG36_RS06200 (LG36_1173)	ilvA	1285738..1286988 (-)	1251	WP_038600936.1	threonine ammonia-lyase IlvA	-
LG36_RS06205 (LG36_1174)	ilvC	1287044..1288066 (-)	1023	WP_038600939.1	ketol-acid reductoisomerase	-
LG36_RS06210 (LG36_1175)	ilvN	1288111..1288587 (-)	477	WP_010905839.1	acetolactate synthase small subunit	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32158.24 Da
• Isoelectric Point: 9.2209

>NTDB_id=129639 LG36_RS06185 WP_038600928.1 1283497..1284345(-) (dprA) [Lactococcus lactis strain AI06]
MITNFDLYRWKKAGMTNLEVNKLLKFFHRYDKKISLRQMGQVAQLKSIPNFIEQYKNQDVIKLREEYKIYPSFSLLDEIY
PERLKEIYNPPVLLFYQGDISLLKTPKLAFVGSRQASSQGIKAVQKIVTELNQNFTIVSGLAKGIDTASHLSAIKNKIPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLILSEYPVGEKPLRYHFPERNRIIAGLSHGVVVIEAKLRSGSLITCERALEEG
RDIFAVPGNIADGFSDGCNHLIQQGAKLIYQAQDILEEYLYD

Nucleotide

• Length: 849 bp

>NTDB_id=129639 LG36_RS06185 WP_038600928.1 1283497..1284345(-) (dprA) [Lactococcus lactis strain AI06]
ATGATAACAAATTTTGATTTATATCGTTGGAAAAAAGCTGGCATGACCAATTTAGAAGTAAATAAACTTTTAAAATTTTT
TCATAGATATGATAAAAAAATAAGTTTAAGACAAATGGGACAAGTAGCACAACTTAAATCTATTCCCAACTTTATTGAAC
AATATAAAAATCAAGACGTAATTAAACTGAGAGAAGAGTATAAAATATACCCATCATTTTCTCTTCTGGATGAAATTTAT
CCCGAAAGGCTCAAAGAAATTTACAATCCACCGGTTCTATTATTTTATCAAGGAGATATAAGTCTCTTAAAAACTCCTAA
ATTAGCTTTTGTTGGTAGTCGACAAGCAAGCTCGCAAGGAATTAAAGCCGTCCAAAAAATTGTGACAGAGTTGAACCAAA
ATTTTACGATTGTCAGCGGACTCGCTAAAGGAATTGATACAGCAAGTCATCTTTCTGCCATTAAAAATAAAATCCCTACA
ATTGCAGTTATCGGTACAGGCTTAGATATCTTTTATCCTTTAGAAAATCGAAAAATTCAAGAGTATCTTGCTAAAAACCA
ACTAATTCTATCAGAATATCCAGTCGGAGAAAAGCCACTTCGCTATCATTTTCCTGAACGTAATCGCATCATTGCGGGAC
TTTCACATGGAGTAGTGGTGATAGAAGCAAAGTTACGAAGCGGTAGTTTAATTACTTGTGAGCGCGCTCTGGAAGAAGGA
AGAGACATTTTCGCTGTACCAGGAAACATAGCAGATGGATTTTCAGATGGCTGTAATCATCTAATTCAACAAGGAGCAAA
ATTAATTTATCAAGCCCAAGATATCTTAGAAGAATATTTGTATGATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (76-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	86.17	100	0.862
dprA	Streptococcus mutans UA159	60.072	98.582	0.592
dprA/cilB/dalA	Streptococcus mitis SK321	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.929	99.291	0.535
dprA	Haemophilus influenzae Rd KW20	38.889	95.745	0.372
dprA	Latilactobacillus sakei subsp. sakei 23K	38.519	95.745	0.369
dprA	Acinetobacter baylyi ADP1	37.681	97.872	0.369