Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | IX91_RS10245 | Genome accession | NZ_CP009354 |
| Coordinates | 2273793..2274086 (-) | Length | 97 a.a. |
| NCBI ID | WP_004748544.1 | Uniprot ID | F9TCR2 |
| Organism | Vibrio tubiashii ATCC 19109 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2268793..2279086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX91_RS10220 (IX91_10435) | lapB | 2269077..2270246 (-) | 1170 | WP_004743674.1 | lipopolysaccharide assembly protein LapB | - |
| IX91_RS10225 (IX91_10440) | - | 2270273..2270551 (-) | 279 | WP_004743675.1 | LapA family protein | - |
| IX91_RS10230 (IX91_10445) | ihfB | 2270693..2270974 (-) | 282 | WP_004748547.1 | integration host factor subunit beta | - |
| IX91_RS10235 (IX91_10455) | rpsA | 2271186..2272856 (-) | 1671 | WP_004748546.1 | 30S ribosomal protein S1 | - |
| IX91_RS10240 (IX91_10460) | cmk | 2272960..2273640 (-) | 681 | WP_004748545.1 | (d)CMP kinase | - |
| IX91_RS10245 (IX91_10465) | comEA | 2273793..2274086 (-) | 294 | WP_004748544.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| IX91_RS10250 (IX91_10470) | ppiD | 2274222..2276081 (-) | 1860 | WP_004748543.1 | peptidylprolyl isomerase | - |
| IX91_RS10255 (IX91_10475) | - | 2276256..2276528 (-) | 273 | WP_004414742.1 | HU family DNA-binding protein | - |
| IX91_RS10260 (IX91_10480) | lon | 2276722..2279073 (-) | 2352 | WP_004748542.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10309.96 Da Isoelectric Point: 7.1649
>NTDB_id=128861 IX91_RS10245 WP_004748544.1 2273793..2274086(-) (comEA) [Vibrio tubiashii ATCC 19109]
MLKQIILIAALICAAPFSIANDVKSDPKYDGIEITVNINTASAQELADLLNGIGIKKAQAIVEHRKQHGEFASAESLTEV
KGIGAAIVAKNQSRIQL
MLKQIILIAALICAAPFSIANDVKSDPKYDGIEITVNINTASAQELADLLNGIGIKKAQAIVEHRKQHGEFASAESLTEV
KGIGAAIVAKNQSRIQL
Nucleotide
Download Length: 294 bp
>NTDB_id=128861 IX91_RS10245 WP_004748544.1 2273793..2274086(-) (comEA) [Vibrio tubiashii ATCC 19109]
ATGCTAAAACAGATAATTCTCATTGCGGCACTGATATGTGCTGCGCCTTTCTCTATTGCCAACGATGTTAAATCTGATCC
CAAGTATGACGGCATTGAAATTACGGTGAACATAAACACCGCTAGTGCGCAGGAGTTGGCAGATTTACTCAATGGAATTG
GCATAAAGAAAGCTCAAGCGATCGTCGAGCATCGAAAGCAACATGGTGAGTTTGCCAGTGCAGAGTCTTTAACCGAAGTG
AAAGGAATTGGCGCTGCAATTGTTGCCAAAAATCAATCTCGGATCCAACTGTAA
ATGCTAAAACAGATAATTCTCATTGCGGCACTGATATGTGCTGCGCCTTTCTCTATTGCCAACGATGTTAAATCTGATCC
CAAGTATGACGGCATTGAAATTACGGTGAACATAAACACCGCTAGTGCGCAGGAGTTGGCAGATTTACTCAATGGAATTG
GCATAAAGAAAGCTCAAGCGATCGTCGAGCATCGAAAGCAACATGGTGAGTTTGCCAGTGCAGAGTCTTTAACCGAAGTG
AAAGGAATTGGCGCTGCAATTGTTGCCAAAAATCAATCTCGGATCCAACTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.511 |
96.907 |
0.567 |
| comEA | Vibrio campbellii strain DS40M4 |
55.319 |
96.907 |
0.536 |
| comEA | Vibrio cholerae C6706 |
63.235 |
70.103 |
0.443 |
| comEA | Vibrio cholerae strain A1552 |
63.235 |
70.103 |
0.443 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.364 |
100 |
0.371 |
| comEA | Legionella pneumophila str. Paris |
36.364 |
100 |
0.371 |
| comE | Neisseria gonorrhoeae MS11 |
40.449 |
91.753 |
0.371 |
| comE | Neisseria gonorrhoeae MS11 |
40.449 |
91.753 |
0.371 |
| comE | Neisseria gonorrhoeae MS11 |
40.449 |
91.753 |
0.371 |
| comE | Neisseria gonorrhoeae MS11 |
40.449 |
91.753 |
0.371 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.404 |
58.763 |
0.361 |