Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BMMGA3_RS06315 Genome accession   NZ_CP007739
Coordinates   1274286..1275536 (+) Length   416 a.a.
NCBI ID   WP_003349161.1    Uniprot ID   I3DZI5
Organism   Bacillus methanolicus MGA3     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1269286..1280536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMMGA3_RS06290 (BMMGA3_06460) ymfI 1270645..1271367 (+) 723 WP_003349156.1 elongation factor P 5-aminopentanone reductase -
  BMMGA3_RS06295 (BMMGA3_06465) - 1271462..1271719 (+) 258 WP_003349157.1 DUF3243 domain-containing protein -
  BMMGA3_RS06300 (BMMGA3_06470) - 1271906..1272697 (+) 792 WP_003349158.1 DUF3388 domain-containing protein -
  BMMGA3_RS06305 (BMMGA3_06475) - 1272719..1273618 (+) 900 WP_003349159.1 helix-turn-helix domain-containing protein -
  BMMGA3_RS06310 (BMMGA3_06480) pgsA 1273683..1274261 (+) 579 WP_034669577.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BMMGA3_RS06315 (BMMGA3_06485) cinA 1274286..1275536 (+) 1251 WP_003349161.1 competence/damage-inducible protein A Machinery gene
  BMMGA3_RS06320 (BMMGA3_06490) recA 1275817..1276857 (+) 1041 WP_003349162.1 recombinase RecA Machinery gene
  BMMGA3_RS06325 (BMMGA3_06495) rny 1277139..1278698 (+) 1560 WP_003349163.1 ribonuclease Y -
  BMMGA3_RS06330 (BMMGA3_06500) - 1278784..1279581 (+) 798 WP_003349164.1 TIGR00282 family metallophosphoesterase -
  BMMGA3_RS06335 (BMMGA3_06505) spoVS 1279866..1280126 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45502.53 Da        Isoelectric Point: 5.5535

>NTDB_id=122995 BMMGA3_RS06315 WP_003349161.1 1274286..1275536(+) (cinA) [Bacillus methanolicus MGA3]
MNAEIIAVGSELLLGQIVNTNARFISKHLADAGINVFYHSVVGDNPGRLKSVLEVAERRSNIIIFTGGLGPTKDDLTKET
IAAHIGTELVLDDDAFRWIEEFYAKTGMEMTENNRKQALVLKGSQVLKNEHGMAPGMLLDTGKRIYMLLPGPPKEMEPMF
SKYALPALLSKLNMQEKLVSRVIRFFGISEALLEAKVQDIIDQQSNPTIAPLAAEWDVTLRLTAKHSSIETALQLIDETE
KLILERVGEYKYGYDDTSLMKELTKVLKQNGLTISCAESLTGGLFQQELTSIPGTTDILKGGVVCYTRESKEKVLLVQKE
TIDKEGVVSEACASELAENAAKIFQSDIGISFTGVAGPEELEGKPAGTVFIGISIKGRPTLVKKVNLAGTRDAIRTQTVK
HGCFYLLKLLSESQSA

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=122995 BMMGA3_RS06315 WP_003349161.1 1274286..1275536(+) (cinA) [Bacillus methanolicus MGA3]
ATGAACGCGGAAATCATTGCTGTAGGCTCTGAATTGCTGCTTGGACAAATTGTAAACACGAATGCTCGTTTTATTTCGAA
GCATTTGGCTGATGCCGGAATTAATGTATTTTATCATTCAGTTGTCGGAGATAATCCCGGACGATTGAAATCTGTTCTCG
AAGTTGCTGAAAGACGTTCTAATATTATTATTTTCACCGGCGGGCTAGGTCCGACGAAAGATGATTTAACGAAAGAGACG
ATTGCTGCTCACATCGGTACAGAACTGGTCTTGGATGATGATGCTTTTCGTTGGATTGAGGAATTTTATGCAAAAACAGG
GATGGAGATGACTGAGAACAATCGAAAACAAGCATTGGTTCTTAAAGGTTCGCAAGTGTTGAAAAACGAACACGGAATGG
CACCGGGCATGCTGCTTGACACGGGTAAACGTATTTACATGCTTTTGCCGGGGCCTCCTAAAGAAATGGAGCCGATGTTT
TCAAAATATGCGCTGCCTGCTCTATTAAGCAAATTGAACATGCAAGAAAAACTTGTATCAAGAGTCATTAGGTTTTTTGG
AATTAGCGAGGCTCTGTTGGAAGCGAAAGTTCAAGATATCATTGATCAGCAAAGCAATCCGACAATTGCTCCGCTTGCTG
CGGAATGGGATGTCACCCTTCGCTTAACAGCAAAACACAGTTCAATTGAAACGGCACTCCAGCTTATTGATGAAACAGAA
AAATTAATCTTAGAGCGTGTTGGAGAGTATAAATACGGATATGACGATACTTCCTTGATGAAAGAACTTACGAAGGTTTT
GAAACAAAATGGCCTGACGATTTCGTGTGCTGAAAGTTTAACAGGCGGGTTGTTCCAACAAGAATTAACTTCTATTCCAG
GAACCACTGACATTCTAAAAGGCGGAGTTGTTTGTTATACCCGGGAGTCGAAAGAGAAAGTGCTCCTCGTTCAAAAAGAA
ACCATTGACAAAGAAGGGGTTGTCAGTGAAGCCTGCGCGTCTGAACTGGCAGAGAATGCTGCTAAAATCTTTCAATCTGA
TATTGGCATCAGCTTTACCGGAGTGGCCGGTCCGGAAGAATTAGAAGGTAAACCGGCAGGCACTGTTTTTATTGGAATTT
CGATTAAGGGCCGTCCAACTCTCGTAAAAAAAGTGAATCTTGCCGGAACTCGGGATGCCATCCGCACCCAAACAGTCAAA
CATGGATGTTTTTACTTATTAAAATTACTTTCAGAATCACAGAGTGCTTGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(257-409)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I3DZI5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

60.488

98.558

0.596
  cinA Streptococcus mitis SK321

47.17

100

0.481
  cinA Streptococcus mitis NCTC 12261

47.17

100

0.481
  cinA Streptococcus pneumoniae TIGR4

46.226

100

0.471
  cinA Streptococcus pneumoniae Rx1

45.991

100

0.469
  cinA Streptococcus pneumoniae R6

45.991

100

0.469
  cinA Streptococcus pneumoniae D39

45.755

100

0.466
  cinA Streptococcus mutans UA159

46.247

99.279

0.459
  cinA Streptococcus suis isolate S10

39.747

94.952

0.377

Multiple sequence alignment