Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | EN71_RS01095 | Genome accession | NZ_CP007631 |
| Coordinates | 189123..189452 (+) | Length | 109 a.a. |
| NCBI ID | WP_000793380.1 | Uniprot ID | A0A0E1EKJ1 |
| Organism | Streptococcus agalactiae strain NGBS061 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IScluster/Tn | 189547..190352 | 189123..189452 | flank | 95 |
Gene organization within MGE regions
Location: 189123..190352
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EN71_RS01095 (EN72_01120) | comGC/cglC | 189123..189452 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EN71_RS11820 | - | 189427..189537 (+) | 111 | Protein_164 | competence protein | - |
Sequence
Protein
Download Length: 109 a.a. Molecular weight: 12129.27 Da Isoelectric Point: 10.0311
>NTDB_id=121820 EN71_RS01095 WP_000793380.1 189123..189452(+) (comGC/cglC) [Streptococcus agalactiae strain NGBS061]
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLK
SGGYITEKQEKAYLDYYKDSSNGSQKISS
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLK
SGGYITEKQEKAYLDYYKDSSNGSQKISS
Nucleotide
Download Length: 330 bp
>NTDB_id=121820 EN71_RS01095 WP_000793380.1 189123..189452(+) (comGC/cglC) [Streptococcus agalactiae strain NGBS061]
ATGAAAAATTTATTGTTAAAATGTAAGGATAAGAAGGTTAAAGCATTTACACTTTTAGAAATGTTAGTTGTTTTGATCAT
TATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCACAAGAACTGGAAATGCCGCTG
TTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAGCTAGTTTATCCACTCTAAAA
TCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGTTCCAATGGTTCTCAGAAAAT
TTCAAGTTAA
ATGAAAAATTTATTGTTAAAATGTAAGGATAAGAAGGTTAAAGCATTTACACTTTTAGAAATGTTAGTTGTTTTGATCAT
TATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCACAAGAACTGGAAATGCCGCTG
TTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAGCTAGTTTATCCACTCTAAAA
TCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGTTCCAATGGTTCTCAGAAAAT
TTCAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
60.55 |
100 |
0.606 |
| comGC/cglC | Streptococcus mitis SK321 |
59.633 |
100 |
0.596 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
61.165 |
94.495 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae R6 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
57.798 |
100 |
0.578 |
| comGC/cglC | Streptococcus pneumoniae D39 |
57.798 |
100 |
0.578 |
| comYC | Streptococcus mutans UA159 |
55.238 |
96.33 |
0.532 |
| comYC | Streptococcus mutans UA140 |
55.238 |
96.33 |
0.532 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
63.043 |
84.404 |
0.532 |
| comYC | Streptococcus suis isolate S10 |
65.854 |
75.229 |
0.495 |