Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   OWO33_RS01400 Genome accession   NZ_OX461090
Coordinates   236658..236846 (+) Length   62 a.a.
NCBI ID   WP_000965190.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-336     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 231658..241846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OWO33_RS01370 - 232114..234120 (+) 2007 WP_000537329.1 DUF859 family phage minor structural protein -
  OWO33_RS01375 - 234146..234475 (+) 330 WP_000494204.1 DUF1366 domain-containing protein -
  OWO33_RS01380 - 234450..234662 (+) 213 WP_000698337.1 hypothetical protein -
  OWO33_RS01385 - 234675..234980 (+) 306 WP_000215496.1 hypothetical protein -
  OWO33_RS01390 - 234977..235312 (+) 336 WP_001001966.1 phage holin -
  OWO33_RS01395 - 235314..236501 (+) 1188 WP_000215268.1 peptidoglycan amidohydrolase family protein -
  OWO33_RS01400 prx 236658..236846 (+) 189 WP_000965190.1 hypothetical protein Regulator
  OWO33_RS01405 comYD 236837..237235 (+) 399 WP_024440007.1 competence type IV pilus minor pilin ComGD Machinery gene
  OWO33_RS01410 comGE 237207..237506 (+) 300 WP_000234804.1 competence type IV pilus minor pilin ComGE -
  OWO33_RS01415 comGF 237460..237921 (+) 462 WP_001874812.1 competence type IV pilus minor pilin ComGF -
  OWO33_RS01420 comGG 237899..238270 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG -
  OWO33_RS01425 comYH 238385..239359 (+) 975 WP_001008574.1 N-6 DNA methylase Machinery gene
  OWO33_RS01430 - 239391..240584 (+) 1194 WP_000047534.1 acetate kinase -
  OWO33_RS01435 - 240736..240942 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  OWO33_RS01440 - 241001..241138 (+) 138 WP_001865900.1 hypothetical protein -
  OWO33_RS01445 - 241179..241634 (+) 456 WP_000905673.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7108.12 Da        Isoelectric Point: 3.9330

>NTDB_id=1159691 OWO33_RS01400 WP_000965190.1 236658..236846(+) (prx) [Streptococcus agalactiae isolate MRI Z2-336]
MLYFDELKQAVDNGYITGDMVNVVRKEGKLFDYVLPGEPVRPWEVVSVEPLAEVMAELSEYQ

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1159691 OWO33_RS01400 WP_000965190.1 236658..236846(+) (prx) [Streptococcus agalactiae isolate MRI Z2-336]
ATGCTATATTTTGATGAATTAAAACAGGCGGTAGATAACGGCTACATCACAGGGGATATGGTCAACGTGGTCAGAAAAGA
GGGCAAGCTCTTTGATTATGTTTTGCCAGGGGAACCTGTGAGACCTTGGGAGGTGGTTAGTGTAGAGCCTTTAGCTGAGG
TTATGGCAGAACTTTCTGAATATCAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

61.667

96.774

0.597
  prx Streptococcus pyogenes MGAS8232

61.017

95.161

0.581
  prx Streptococcus pyogenes MGAS315

58.333

96.774

0.565
  prx Streptococcus pyogenes MGAS315

55.932

95.161

0.532
  prx Streptococcus pyogenes MGAS315

71.429

67.742

0.484
  prx Streptococcus pyogenes MGAS315

68.293

66.129

0.452
  prx Streptococcus pyogenes MGAS315

63.415

66.129

0.419

Multiple sequence alignment