Detailed information NTG1154978

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: QML50_RS00590
• Genome accession: NZ_OX346403
• Coordinates: 115040..116287 (+)
• Length: 415 a.a.
• NCBI ID: WP_281956612.1
• Uniprot ID: -
• Organism: Enterococcus cecorum isolate CIRMBP-1283
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	113517..114335	115040..116287	flank	705

Gene organization within MGE regions

Location: 113517..116287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QML50_RS00590 (CIRMBP1283_00114)	cinA	115040..116287 (+)	1248	WP_281956612.1	competence/damage-inducible protein A	Machinery gene

Sequence

Protein

• Length: 415 a.a.
• Molecular weight: 45538.92 Da
• Isoelectric Point: 4.8446

>NTDB_id=1154978 QML50_RS00590 WP_281956612.1 115040..116287(+) (cinA) [Enterococcus cecorum isolate CIRMBP-1283]
MNAEIIAVGTEILMGQIVNSNAAYLSEQLANLGINVYYHVAVGDNEKRLTACLERAKSRSDLIVLCGGLGPTQDDLTKQT
VAKFVNQELVYDPTGHARLMDYFAKTKREMTENNLLQALTFKDGRGIANPNGLAVGIYYEDSDHTHYLLLPGPPRELKAM
FRQNVVPLLREINPQDTKLYSRVLRFYGIGESQLVTLLADFIDYQTNPTLAPYAKTNEVTLRLTANASTQDQADRLLDEL
EEKIQALAGAYFYGYGDDFSLAEAMIAQLKEQKRTISVAESLTAGLFASTLGQYPGVSQVFKGGVVTYSLEMKAALLDID
ADYLREVGTVSEACVTLMAKNMQQKAQTDYAIAFSGVAGPDQLEGQAVGTVWMALATPNGVQTCCKQFPHGRNEIRQAAV
MFGLNLVYRALLAEA

Nucleotide

• Length: 1248 bp

>NTDB_id=1154978 QML50_RS00590 WP_281956612.1 115040..116287(+) (cinA) [Enterococcus cecorum isolate CIRMBP-1283]
ATGAATGCAGAAATCATTGCAGTCGGAACAGAGATTTTGATGGGGCAAATCGTTAATTCTAACGCGGCCTATCTTTCAGA
GCAATTAGCCAATTTGGGGATTAATGTTTATTATCATGTCGCAGTCGGAGATAATGAAAAGCGATTGACGGCCTGTCTTG
AACGTGCCAAAAGTCGGAGTGATTTAATCGTGCTTTGTGGTGGTTTGGGGCCTACGCAAGATGATTTAACCAAGCAAACT
GTAGCCAAATTTGTCAATCAAGAATTAGTCTATGATCCAACAGGGCATGCACGTTTGATGGATTATTTTGCCAAGACCAA
GCGAGAAATGACCGAAAATAATTTATTACAAGCCCTCACTTTTAAGGATGGTCGTGGTATTGCCAATCCAAATGGTCTAG
CGGTCGGTATTTATTATGAAGATAGCGATCATACTCACTATTTATTATTACCTGGGCCACCGCGCGAGTTAAAGGCGATG
TTTCGTCAAAATGTTGTGCCACTTTTGCGTGAAATCAATCCGCAAGATACGAAGCTCTATTCTCGGGTGTTGCGTTTTTA
TGGTATTGGCGAATCGCAGTTAGTCACGCTTTTAGCGGATTTCATTGACTATCAGACCAACCCTACGCTAGCTCCCTATG
CCAAAACCAATGAAGTGACGTTGCGTTTGACAGCCAATGCATCTACCCAAGATCAAGCGGATAGGTTGCTTGATGAATTA
GAGGAGAAAATTCAAGCTTTGGCCGGTGCTTACTTTTATGGTTATGGGGATGATTTTTCTTTAGCGGAGGCGATGATTGC
CCAATTAAAAGAGCAAAAACGGACAATCAGTGTGGCTGAGAGTTTGACAGCCGGCCTTTTTGCTTCCACCTTGGGACAAT
ATCCGGGGGTGTCACAGGTCTTTAAAGGTGGTGTGGTCACTTATTCCCTTGAGATGAAGGCGGCTTTATTAGATATTGAT
GCCGATTATTTACGAGAAGTCGGTACGGTGAGTGAAGCTTGTGTCACCTTAATGGCTAAAAATATGCAGCAAAAAGCGCA
AACGGATTATGCCATTGCTTTTAGTGGTGTGGCGGGACCGGATCAATTAGAAGGCCAAGCAGTCGGAACTGTCTGGATGG
CTTTGGCGACTCCAAATGGGGTACAGACCTGTTGCAAACAGTTCCCCCATGGCCGCAATGAAATCCGCCAAGCCGCTGTC
ATGTTTGGGTTAAATCTCGTTTATCGCGCGCTTTTAGCGGAAGCATAG

Domains

Predicted by InterproScan.

• Competence-damaged protein (CinA) (260-410)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-170)

• Damage-inducible protein CinA KH domain (CinA_KH) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus pneumoniae TIGR4	51.537	100	0.525
cinA	Streptococcus pneumoniae Rx1	51.3	100	0.523
cinA	Streptococcus pneumoniae R6	51.3	100	0.523
cinA	Streptococcus mitis SK321	51.3	100	0.523
cinA	Streptococcus pneumoniae D39	51.064	100	0.52
cinA	Streptococcus mutans UA159	51.435	100	0.518
cinA	Streptococcus mitis NCTC 12261	50.591	100	0.516
cinA	Streptococcus suis isolate S10	47.532	92.771	0.441
cinA	Bacillus subtilis subsp. subtilis str. 168	44.39	98.795	0.439