Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LSO74_RS04165 | Genome accession | NZ_OV040719 |
| Coordinates | 788327..788776 (+) | Length | 149 a.a. |
| NCBI ID | WP_005656280.1 | Uniprot ID | A0A0H3PDQ7 |
| Organism | Haemophilus influenzae strain 3655 isolate 3655 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 783327..793776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSO74_RS04145 (KRLU3655_LOCUS784) | rsmE | 783793..784530 (-) | 738 | WP_005656289.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| LSO74_RS04150 (KRLU3655_LOCUS785) | lnt | 784580..786109 (-) | 1530 | WP_079997635.1 | apolipoprotein N-acyltransferase | - |
| LSO74_RS04155 (KRLU3655_LOCUS786) | corC | 786132..787031 (-) | 900 | WP_005656283.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| LSO74_RS04160 (KRLU3655_LOCUS787) | ampD | 787652..788212 (-) | 561 | WP_005648974.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| LSO74_RS04165 (KRLU3655_LOCUS788) | pilA | 788327..788776 (+) | 450 | WP_005656280.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LSO74_RS04170 (KRLU3655_LOCUS789) | pilB | 788773..790167 (+) | 1395 | WP_005656265.1 | GspE/PulE family protein | Machinery gene |
| LSO74_RS04175 (KRLU3655_LOCUS790) | pilC | 790164..791384 (+) | 1221 | WP_005656262.1 | type II secretion system F family protein | Machinery gene |
| LSO74_RS04180 (KRLU3655_LOCUS791) | pilD | 791381..792073 (+) | 693 | WP_005656260.1 | prepilin peptidase | Machinery gene |
| LSO74_RS04185 (KRLU3655_LOCUS792) | rho | 792127..793389 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15684.12 Da Isoelectric Point: 9.3906
>NTDB_id=1151774 LSO74_RS04165 WP_005656280.1 788327..788776(+) (pilA) [Haemophilus influenzae strain 3655 isolate 3655]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKASVSELLQASAPYKADVELCVYSTNETTNCTGGKNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCRSVTK
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKASVSELLQASAPYKADVELCVYSTNETTNCTGGKNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQAKGNATAGVTWTTTCKGTDASLFPANFCRSVTK
Nucleotide
Download Length: 450 bp
>NTDB_id=1151774 LSO74_RS04165 WP_005656280.1 788327..788776(+) (pilA) [Haemophilus influenzae strain 3655 isolate 3655]
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTTCGGTATCCGAATTACTGCAAGCATCTGCAC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAACAACAAACTGTACGGGTGGAAAAAATGGTATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCAGAAGTGTCACAAAATGA
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTTCGGTATCCGAATTACTGCAAGCATCTGCAC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAACAACAAACTGTACGGGTGGAAAAAATGGTATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTAAAGGTAATGCTACAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCAGAAGTGTCACAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
95.302 |
100 |
0.953 |
| pilA | Haemophilus influenzae 86-028NP |
91.946 |
100 |
0.919 |
| pilA | Glaesserella parasuis strain SC1401 |
54.054 |
99.329 |
0.537 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.667 |
100 |
0.409 |
| pilA2 | Legionella pneumophila str. Paris |
40.845 |
95.302 |
0.389 |
| pilA | Vibrio campbellii strain DS40M4 |
40.426 |
94.631 |
0.383 |