Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LSO75_RS03650 | Genome accession | NZ_OV040584 |
| Coordinates | 712080..712529 (+) | Length | 149 a.a. |
| NCBI ID | WP_044364865.1 | Uniprot ID | A0AAJ8WBN7 |
| Organism | Haemophilus influenzae isolate KR271 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 707080..717529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSO75_RS03630 (KRLU271_LOCUS685) | rsmE | 707540..708277 (-) | 738 | WP_044364858.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| LSO75_RS03635 (KRLU271_LOCUS686) | lnt | 708327..709856 (-) | 1530 | WP_080452425.1 | apolipoprotein N-acyltransferase | - |
| LSO75_RS03640 (KRLU271_LOCUS687) | corC | 709879..710778 (-) | 900 | WP_044364861.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| LSO75_RS03645 (KRLU271_LOCUS688) | ampD | 711411..711965 (-) | 555 | WP_044364862.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| LSO75_RS03650 (KRLU271_LOCUS689) | pilA | 712080..712529 (+) | 450 | WP_044364865.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LSO75_RS03655 (KRLU271_LOCUS690) | pilB | 712526..713920 (+) | 1395 | WP_044364868.1 | GspE/PulE family protein | Machinery gene |
| LSO75_RS03660 (KRLU271_LOCUS691) | pilC | 713917..715137 (+) | 1221 | WP_011271971.1 | type II secretion system F family protein | Machinery gene |
| LSO75_RS03665 (KRLU271_LOCUS692) | pilD | 715134..715826 (+) | 693 | WP_038440789.1 | prepilin peptidase | Machinery gene |
| LSO75_RS03670 (KRLU271_LOCUS693) | rho | 715880..717142 (-) | 1263 | WP_005629550.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15541.88 Da Isoelectric Point: 8.4623
>NTDB_id=1151739 LSO75_RS03650 WP_044364865.1 712080..712529(+) (pilA) [Haemophilus influenzae isolate KR271]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTNCTGGKNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTNCTGGKNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1151739 LSO75_RS03650 WP_044364865.1 712080..712529(+) (pilA) [Haemophilus influenzae isolate KR271]
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAACAACAAACTGTACGGGTGGAAAAAATGGTATTGCA
GCAGATATAACCACAGCAAAAGGCTATGTAGCCTCAGTGAAAACGCAATCAGGCGGCATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAACAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCTGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAACAACAAACTGTACGGGTGGAAAAAATGGTATTGCA
GCAGATATAACCACAGCAAAAGGCTATGTAGCCTCAGTGAAAACGCAATCAGGCGGCATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAACAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCTGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
95.973 |
100 |
0.96 |
| pilA | Haemophilus influenzae Rd KW20 |
95.302 |
100 |
0.953 |
| pilA | Glaesserella parasuis strain SC1401 |
54.362 |
100 |
0.544 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.136 |
98.658 |
0.396 |
| pilA | Vibrio campbellii strain DS40M4 |
41.135 |
94.631 |
0.389 |
| pilA2 | Legionella pneumophila str. Paris |
40.288 |
93.289 |
0.376 |