Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | V469_RS03940 | Genome accession | NZ_CP006883 |
| Coordinates | 831020..831340 (-) | Length | 106 a.a. |
| NCBI ID | WP_011707247.1 | Uniprot ID | A0AAX0XL99 |
| Organism | Aeromonas hydrophila J-1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 826020..836340
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V469_RS03920 (V469_03980) | - | 826341..827018 (-) | 678 | WP_016351863.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| V469_RS03925 (V469_03985) | - | 827358..828329 (+) | 972 | WP_043119376.1 | response regulator | - |
| V469_RS03930 (V469_03990) | - | 828402..829799 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| V469_RS03935 (V469_03995) | galU | 830013..830924 (-) | 912 | WP_043119374.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| V469_RS03940 (V469_04000) | comEA | 831020..831340 (-) | 321 | WP_011707247.1 | ComEA family DNA-binding protein | Machinery gene |
| V469_RS03945 (V469_04005) | cysQ | 831509..832279 (+) | 771 | WP_016351859.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| V469_RS03950 (V469_04010) | - | 832360..832656 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| V469_RS03955 (V469_04015) | - | 832682..833233 (-) | 552 | WP_016351858.1 | septation protein A | - |
| V469_RS03960 (V469_04020) | - | 833338..834843 (-) | 1506 | WP_016351857.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| V469_RS03965 (V469_04025) | trhA | 835068..835703 (+) | 636 | WP_016351856.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=114786 V469_RS03940 WP_011707247.1 831020..831340(-) (comEA) [Aeromonas hydrophila J-1]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=114786 V469_RS03940 WP_011707247.1 831020..831340(-) (comEA) [Aeromonas hydrophila J-1]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACAGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAATACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACAGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAATACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.939 |
92.453 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |