Detailed information NTG1147745

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: CKV93_RS05445
• Genome accession: NZ_LT906464
• Coordinates: 1129926..1130246 (+)
• Length: 106 a.a.
• NCBI ID: WP_095116807.1
• Uniprot ID: -
• Organism: Staphylococcus muscae strain NCTC13833
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1124926..1135246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV93_RS05415 (SAMEA4412661_01108)	-	1125688..1125891 (+)	204	WP_095116793.1	YqgQ family protein	-
CKV93_RS05420 (SAMEA4412661_01109)	-	1125888..1126868 (+)	981	WP_095116795.1	ROK family glucokinase	-
CKV93_RS05425 (SAMEA4412661_01110)	-	1126875..1127186 (+)	312	WP_095116797.1	MTH1187 family thiamine-binding protein	-
CKV93_RS05430 (SAMEA4412661_01111)	-	1127214..1127837 (+)	624	WP_095116800.1	MBL fold metallo-hydrolase	-
CKV93_RS05435 (SAMEA4412661_01112)	comGA	1127904..1128878 (+)	975	WP_095116803.1	competence type IV pilus ATPase ComGA	Machinery gene
CKV93_RS05440 (SAMEA4412661_01113)	comGB	1128847..1129914 (+)	1068	WP_095116805.1	competence type IV pilus assembly protein ComGB	-
CKV93_RS05445 (SAMEA4412661_01114)	comGC	1129926..1130246 (+)	321	WP_095116807.1	competence type IV pilus major pilin ComGC	Machinery gene
CKV93_RS05450 (SAMEA4412661_01115)	comGD	1130236..1130667 (+)	432	WP_157728687.1	competence type IV pilus minor pilin ComGD	-
CKV93_RS10775	-	1130664..1130939 (+)	276	WP_095118129.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
CKV93_RS05460 (SAMEA4412661_01116)	-	1130854..1131348 (+)	495	WP_095116813.1	competence type IV pilus minor pilin ComGF	-
CKV93_RS05470	-	1131514..1132038 (+)	525	WP_095116816.1	shikimate kinase	-
CKV93_RS05475 (SAMEA4412661_01119)	gcvT	1132198..1133289 (+)	1092	WP_095116818.1	glycine cleavage system aminomethyltransferase GcvT	-
CKV93_RS05480 (SAMEA4412661_01120)	gcvPA	1133302..1134651 (+)	1350	WP_095116819.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 106 a.a.
• Molecular weight: 11983.15 Da
• Isoelectric Point: 9.5852

>NTDB_id=1147745 CKV93_RS05445 WP_095116807.1 1129926..1130246(+) (comGC) [Staphylococcus muscae strain NCTC13833]
MKKLFLTLKQNKAFTLIEMLLVLLIISVLLILIIPNIAKQSDHIQKTGCKAQTRLVDSQIEAYTLKFNHKPNSIDDLVRE
GYIKENQKTCKSGETIRIQDGEAVAS

Nucleotide

• Length: 321 bp

>NTDB_id=1147745 CKV93_RS05445 WP_095116807.1 1129926..1130246(+) (comGC) [Staphylococcus muscae strain NCTC13833]
ATGAAAAAATTATTTTTAACATTGAAACAAAACAAAGCTTTTACACTAATTGAAATGTTACTTGTCCTTTTAATCATTAG
TGTATTGCTTATCTTAATTATCCCCAATATCGCAAAACAATCTGATCATATTCAAAAGACTGGGTGTAAAGCACAAACTC
GACTTGTTGACAGTCAGATTGAAGCTTATACATTAAAATTTAACCATAAACCAAATTCAATTGATGATCTTGTGAGAGAA
GGATACATCAAAGAGAATCAAAAAACATGTAAATCTGGTGAAACAATCCGAATTCAAGATGGTGAGGCTGTTGCATCATA
A

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (9-33)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	70.874	97.17	0.689
comGC	Staphylococcus aureus N315	70.874	97.17	0.689
comGC/cglC	Streptococcus mitis SK321	47.191	83.962	0.396
comGC/cglC	Streptococcus mitis NCTC 12261	47.191	83.962	0.396
comGC/cglC	Streptococcus pneumoniae D39	46.067	83.962	0.387
comGC/cglC	Streptococcus pneumoniae R6	46.067	83.962	0.387
comGC/cglC	Streptococcus pneumoniae TIGR4	46.067	83.962	0.387
comGC/cglC	Streptococcus pneumoniae Rx1	46.067	83.962	0.387
comGC	Lactococcus lactis subsp. cremoris KW2	46.512	81.132	0.377
comGC	Bacillus subtilis subsp. subtilis str. 168	43.956	85.849	0.377