Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CKV93_RS05435 | Genome accession | NZ_LT906464 |
| Coordinates | 1127904..1128878 (+) | Length | 324 a.a. |
| NCBI ID | WP_095116803.1 | Uniprot ID | A0A240C4G8 |
| Organism | Staphylococcus muscae strain NCTC13833 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1122904..1133878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV93_RS05405 (SAMEA4412661_01106) | - | 1123691..1124245 (+) | 555 | WP_095116789.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CKV93_RS05410 (SAMEA4412661_01107) | - | 1124247..1125686 (+) | 1440 | WP_095116791.1 | rhomboid family intramembrane serine protease | - |
| CKV93_RS05415 (SAMEA4412661_01108) | - | 1125688..1125891 (+) | 204 | WP_095116793.1 | YqgQ family protein | - |
| CKV93_RS05420 (SAMEA4412661_01109) | - | 1125888..1126868 (+) | 981 | WP_095116795.1 | ROK family glucokinase | - |
| CKV93_RS05425 (SAMEA4412661_01110) | - | 1126875..1127186 (+) | 312 | WP_095116797.1 | MTH1187 family thiamine-binding protein | - |
| CKV93_RS05430 (SAMEA4412661_01111) | - | 1127214..1127837 (+) | 624 | WP_095116800.1 | MBL fold metallo-hydrolase | - |
| CKV93_RS05435 (SAMEA4412661_01112) | comGA | 1127904..1128878 (+) | 975 | WP_095116803.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CKV93_RS05440 (SAMEA4412661_01113) | comGB | 1128847..1129914 (+) | 1068 | WP_095116805.1 | competence type IV pilus assembly protein ComGB | - |
| CKV93_RS05445 (SAMEA4412661_01114) | comGC | 1129926..1130246 (+) | 321 | WP_095116807.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CKV93_RS05450 (SAMEA4412661_01115) | comGD | 1130236..1130667 (+) | 432 | WP_157728687.1 | competence type IV pilus minor pilin ComGD | - |
| CKV93_RS10775 | - | 1130664..1130939 (+) | 276 | WP_095118129.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CKV93_RS05460 (SAMEA4412661_01116) | - | 1130854..1131348 (+) | 495 | WP_095116813.1 | competence type IV pilus minor pilin ComGF | - |
| CKV93_RS05470 | - | 1131514..1132038 (+) | 525 | WP_095116816.1 | shikimate kinase | - |
| CKV93_RS05475 (SAMEA4412661_01119) | gcvT | 1132198..1133289 (+) | 1092 | WP_095116818.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36727.08 Da Isoelectric Point: 6.1187
>NTDB_id=1147744 CKV93_RS05435 WP_095116803.1 1127904..1128878(+) (comGA) [Staphylococcus muscae strain NCTC13833]
MQFLLDTVLQHALSEGASDIHFIPSSDHVEVKLRVNDQLSLYDSLNLETYQRLLTLLKFQAGLDVSSRHRAQSGRYIYHF
KDLYYLRVSTLPINLGNESCVIRITPQYFQNIALENTEDICSLMEKKQGLILFSGPTGAGKSTLMYQMVLYAKQTLNLNV
ITIEDPVERLINGVTQISVNEKADITYNASLKAILRCDPDVILIGEIRDASIAHDVIQASLSGHLVLTTIHANDCQGVLL
RLIEMGVSKQDLLQATNLIVNQRLVTTTEQKRELVYETMLHNDIQHFFEHNFQLPESFSSLSDKLNLLKEQGVIDAATYR
KYRT
MQFLLDTVLQHALSEGASDIHFIPSSDHVEVKLRVNDQLSLYDSLNLETYQRLLTLLKFQAGLDVSSRHRAQSGRYIYHF
KDLYYLRVSTLPINLGNESCVIRITPQYFQNIALENTEDICSLMEKKQGLILFSGPTGAGKSTLMYQMVLYAKQTLNLNV
ITIEDPVERLINGVTQISVNEKADITYNASLKAILRCDPDVILIGEIRDASIAHDVIQASLSGHLVLTTIHANDCQGVLL
RLIEMGVSKQDLLQATNLIVNQRLVTTTEQKRELVYETMLHNDIQHFFEHNFQLPESFSSLSDKLNLLKEQGVIDAATYR
KYRT
Nucleotide
Download Length: 975 bp
>NTDB_id=1147744 CKV93_RS05435 WP_095116803.1 1127904..1128878(+) (comGA) [Staphylococcus muscae strain NCTC13833]
ATGCAGTTTTTATTGGATACCGTCCTACAACATGCATTGTCTGAAGGTGCATCCGATATACATTTTATTCCATCATCAGA
CCATGTTGAAGTAAAACTACGTGTCAATGACCAGTTATCATTATACGACTCATTAAATTTAGAGACATATCAGCGTTTAT
TAACACTATTAAAATTTCAAGCTGGTCTTGATGTATCTTCCAGACATCGTGCTCAAAGTGGGAGATACATCTATCATTTT
AAAGATTTATATTATTTACGTGTGTCAACTTTGCCCATTAATTTAGGCAATGAGAGTTGTGTTATTCGTATTACTCCACA
GTATTTTCAGAATATTGCACTGGAAAATACAGAGGATATATGCAGTTTAATGGAGAAGAAACAAGGTCTAATACTCTTTA
GCGGACCTACTGGTGCAGGCAAAAGTACGCTTATGTATCAAATGGTTCTCTATGCAAAGCAAACACTTAATCTTAATGTC
ATCACGATTGAAGATCCAGTCGAGAGGCTTATTAATGGTGTGACACAAATATCTGTTAATGAGAAGGCAGATATTACATA
TAATGCTTCACTAAAAGCAATCTTGCGCTGTGACCCTGATGTCATACTTATCGGCGAAATTCGCGATGCATCAATAGCTC
ATGATGTGATACAAGCCAGCTTGAGTGGACATCTAGTGCTCACAACAATTCATGCTAATGATTGTCAAGGCGTTTTGTTA
CGCTTAATCGAAATGGGCGTATCAAAACAAGATTTACTACAAGCTACTAATTTAATTGTAAATCAACGTCTTGTCACCAC
AACCGAACAAAAAAGAGAACTTGTTTATGAAACGATGTTACACAATGATATACAGCACTTTTTTGAACATAACTTTCAAT
TACCAGAATCATTTTCTAGCTTATCGGATAAACTTAATTTGTTGAAAGAACAGGGGGTCATCGATGCGGCAACTTATAGA
AAATATCGAACATAG
ATGCAGTTTTTATTGGATACCGTCCTACAACATGCATTGTCTGAAGGTGCATCCGATATACATTTTATTCCATCATCAGA
CCATGTTGAAGTAAAACTACGTGTCAATGACCAGTTATCATTATACGACTCATTAAATTTAGAGACATATCAGCGTTTAT
TAACACTATTAAAATTTCAAGCTGGTCTTGATGTATCTTCCAGACATCGTGCTCAAAGTGGGAGATACATCTATCATTTT
AAAGATTTATATTATTTACGTGTGTCAACTTTGCCCATTAATTTAGGCAATGAGAGTTGTGTTATTCGTATTACTCCACA
GTATTTTCAGAATATTGCACTGGAAAATACAGAGGATATATGCAGTTTAATGGAGAAGAAACAAGGTCTAATACTCTTTA
GCGGACCTACTGGTGCAGGCAAAAGTACGCTTATGTATCAAATGGTTCTCTATGCAAAGCAAACACTTAATCTTAATGTC
ATCACGATTGAAGATCCAGTCGAGAGGCTTATTAATGGTGTGACACAAATATCTGTTAATGAGAAGGCAGATATTACATA
TAATGCTTCACTAAAAGCAATCTTGCGCTGTGACCCTGATGTCATACTTATCGGCGAAATTCGCGATGCATCAATAGCTC
ATGATGTGATACAAGCCAGCTTGAGTGGACATCTAGTGCTCACAACAATTCATGCTAATGATTGTCAAGGCGTTTTGTTA
CGCTTAATCGAAATGGGCGTATCAAAACAAGATTTACTACAAGCTACTAATTTAATTGTAAATCAACGTCTTGTCACCAC
AACCGAACAAAAAAGAGAACTTGTTTATGAAACGATGTTACACAATGATATACAGCACTTTTTTGAACATAACTTTCAAT
TACCAGAATCATTTTCTAGCTTATCGGATAAACTTAATTTGTTGAAAGAACAGGGGGTCATCGATGCGGCAACTTATAGA
AAATATCGAACATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.443 |
99.691 |
0.593 |
| comGA | Staphylococcus aureus N315 |
59.443 |
99.691 |
0.593 |