Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | BN3853_RS06160 | Genome accession | NZ_LT220504 |
| Coordinates | 1341986..1343227 (-) | Length | 413 a.a. |
| NCBI ID | WP_005688669.1 | Uniprot ID | A0A508YV25 |
| Organism | Lacticaseibacillus rhamnosus strain BPL5 | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1336986..1348227
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN3853_RS06145 | - | 1337941..1338597 (+) | 657 | WP_024129572.1 | YigZ family protein | - |
| BN3853_RS06150 | rny | 1338686..1340257 (-) | 1572 | WP_005684479.1 | ribonuclease Y | - |
| BN3853_RS06155 | recA | 1340882..1341934 (-) | 1053 | WP_005688671.1 | recombinase RecA | Machinery gene |
| BN3853_RS06160 | cinA | 1341986..1343227 (-) | 1242 | WP_005688669.1 | competence/damage-inducible protein A | Machinery gene |
| BN3853_RS06165 | pgsA | 1343456..1344049 (-) | 594 | WP_005688184.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BN3853_RS06170 | - | 1344046..1344981 (-) | 936 | WP_005688668.1 | helix-turn-helix domain-containing protein | - |
| BN3853_RS06175 | ymfI | 1345068..1345796 (-) | 729 | WP_005688666.1 | elongation factor P 5-aminopentanone reductase | - |
| BN3853_RS06180 | yfmH | 1345796..1347088 (-) | 1293 | WP_005688664.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
Sequence
Protein
Download Length: 413 a.a. Molecular weight: 44384.10 Da Isoelectric Point: 8.3237
>NTDB_id=1143622 BN3853_RS06160 WP_005688669.1 1341986..1343227(-) (cinA) [Lacticaseibacillus rhamnosus strain BPL5]
MQAEIIAIGTEILMGQITNTNGAYMAKQLATLGIASYHQQVVGDNAKRLADAISLAEQRSDIVILIGGLGPTPDDLTKQT
LAAHLNLPLVEDAGAMAKLAARVKQQQRPMTPNNRLQAMYPKGAIVLANRVGLAVGAWVEQRQHAYVLLPGPPKEFVPMV
DHELLPRLAKYSGHQEVLESRVMRFFGVGESQLVTDLSDLIANQTNPTLATYIKDHEVTVRVTASGKTQAEAAAKLEPMI
GIIMDREGRYFYGYGDDNSLAQELVKALAASDKQISAAESLTAGAFQAALGDVPGVSAYFKGGFVTYALATKAAFLNIDA
RQLAEHGVVSEFTAKAMAEHARQRAAADIAVSFTGVAGPDKLEGQPAGTVWIGLARLGEKPIAQVYHFPGGRNDVRKRAV
MTGMMMVLKRLRE
MQAEIIAIGTEILMGQITNTNGAYMAKQLATLGIASYHQQVVGDNAKRLADAISLAEQRSDIVILIGGLGPTPDDLTKQT
LAAHLNLPLVEDAGAMAKLAARVKQQQRPMTPNNRLQAMYPKGAIVLANRVGLAVGAWVEQRQHAYVLLPGPPKEFVPMV
DHELLPRLAKYSGHQEVLESRVMRFFGVGESQLVTDLSDLIANQTNPTLATYIKDHEVTVRVTASGKTQAEAAAKLEPMI
GIIMDREGRYFYGYGDDNSLAQELVKALAASDKQISAAESLTAGAFQAALGDVPGVSAYFKGGFVTYALATKAAFLNIDA
RQLAEHGVVSEFTAKAMAEHARQRAAADIAVSFTGVAGPDKLEGQPAGTVWIGLARLGEKPIAQVYHFPGGRNDVRKRAV
MTGMMMVLKRLRE
Nucleotide
Download Length: 1242 bp
>NTDB_id=1143622 BN3853_RS06160 WP_005688669.1 1341986..1343227(-) (cinA) [Lacticaseibacillus rhamnosus strain BPL5]
ATGCAAGCAGAAATTATTGCTATCGGAACGGAAATTCTGATGGGACAAATCACAAATACAAATGGCGCGTATATGGCTAA
ACAACTGGCTACATTAGGTATTGCAAGCTATCATCAACAGGTTGTTGGGGATAACGCAAAACGACTGGCTGACGCGATAA
GTTTGGCTGAACAACGCAGTGATATCGTTATTTTGATTGGCGGTTTAGGACCAACACCGGATGATTTAACGAAGCAAACC
CTAGCCGCACACCTGAATTTACCCTTGGTGGAAGACGCTGGCGCTATGGCCAAGTTGGCTGCGCGGGTTAAACAACAGCA
ACGTCCAATGACACCCAATAATCGCTTGCAAGCGATGTATCCCAAAGGCGCAATCGTATTGGCCAATCGTGTTGGGTTGG
CGGTCGGCGCATGGGTTGAGCAGCGCCAACACGCCTATGTTTTATTGCCGGGACCACCTAAAGAGTTTGTGCCAATGGTT
GATCATGAACTGTTGCCACGACTGGCAAAATATAGCGGGCATCAAGAAGTTTTGGAAAGTCGCGTGATGCGTTTCTTTGG
TGTCGGCGAATCGCAACTTGTGACAGATTTAAGTGATTTAATTGCCAACCAGACGAATCCGACACTTGCAACTTATATAA
AAGATCATGAGGTGACAGTTCGGGTAACTGCGAGTGGCAAAACACAAGCAGAAGCCGCGGCAAAACTTGAGCCAATGATC
GGCATCATTATGGATCGTGAAGGCCGCTACTTTTACGGCTACGGTGACGATAACAGTCTTGCTCAGGAATTAGTCAAAGC
ATTGGCGGCTAGTGATAAGCAAATTAGTGCCGCTGAAAGCCTGACTGCAGGTGCATTTCAAGCGGCATTGGGAGACGTTC
CGGGAGTCTCGGCTTATTTCAAAGGCGGCTTCGTTACGTACGCTTTAGCGACAAAAGCTGCATTTTTAAATATCGATGCC
CGTCAGCTAGCAGAACATGGTGTGGTGAGTGAATTTACTGCCAAAGCAATGGCAGAGCATGCTCGTCAACGAGCCGCGGC
AGACATTGCCGTTAGTTTTACCGGAGTTGCCGGTCCTGACAAGCTGGAAGGACAGCCAGCCGGCACCGTCTGGATTGGTT
TGGCGCGGTTAGGAGAGAAACCAATAGCACAAGTTTATCATTTTCCGGGTGGGCGAAATGACGTCCGCAAGCGCGCCGTT
ATGACGGGGATGATGATGGTGTTGAAGCGTTTACGCGAATAA
ATGCAAGCAGAAATTATTGCTATCGGAACGGAAATTCTGATGGGACAAATCACAAATACAAATGGCGCGTATATGGCTAA
ACAACTGGCTACATTAGGTATTGCAAGCTATCATCAACAGGTTGTTGGGGATAACGCAAAACGACTGGCTGACGCGATAA
GTTTGGCTGAACAACGCAGTGATATCGTTATTTTGATTGGCGGTTTAGGACCAACACCGGATGATTTAACGAAGCAAACC
CTAGCCGCACACCTGAATTTACCCTTGGTGGAAGACGCTGGCGCTATGGCCAAGTTGGCTGCGCGGGTTAAACAACAGCA
ACGTCCAATGACACCCAATAATCGCTTGCAAGCGATGTATCCCAAAGGCGCAATCGTATTGGCCAATCGTGTTGGGTTGG
CGGTCGGCGCATGGGTTGAGCAGCGCCAACACGCCTATGTTTTATTGCCGGGACCACCTAAAGAGTTTGTGCCAATGGTT
GATCATGAACTGTTGCCACGACTGGCAAAATATAGCGGGCATCAAGAAGTTTTGGAAAGTCGCGTGATGCGTTTCTTTGG
TGTCGGCGAATCGCAACTTGTGACAGATTTAAGTGATTTAATTGCCAACCAGACGAATCCGACACTTGCAACTTATATAA
AAGATCATGAGGTGACAGTTCGGGTAACTGCGAGTGGCAAAACACAAGCAGAAGCCGCGGCAAAACTTGAGCCAATGATC
GGCATCATTATGGATCGTGAAGGCCGCTACTTTTACGGCTACGGTGACGATAACAGTCTTGCTCAGGAATTAGTCAAAGC
ATTGGCGGCTAGTGATAAGCAAATTAGTGCCGCTGAAAGCCTGACTGCAGGTGCATTTCAAGCGGCATTGGGAGACGTTC
CGGGAGTCTCGGCTTATTTCAAAGGCGGCTTCGTTACGTACGCTTTAGCGACAAAAGCTGCATTTTTAAATATCGATGCC
CGTCAGCTAGCAGAACATGGTGTGGTGAGTGAATTTACTGCCAAAGCAATGGCAGAGCATGCTCGTCAACGAGCCGCGGC
AGACATTGCCGTTAGTTTTACCGGAGTTGCCGGTCCTGACAAGCTGGAAGGACAGCCAGCCGGCACCGTCTGGATTGGTT
TGGCGCGGTTAGGAGAGAAACCAATAGCACAAGTTTATCATTTTCCGGGTGGGCGAAATGACGTCCGCAAGCGCGCCGTT
ATGACGGGGATGATGATGGTGTTGAAGCGTTTACGCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus mitis SK321 |
51.781 |
100 |
0.528 |
| cinA | Streptococcus mitis NCTC 12261 |
51.781 |
100 |
0.528 |
| cinA | Streptococcus pneumoniae TIGR4 |
51.306 |
100 |
0.523 |
| cinA | Streptococcus pneumoniae Rx1 |
50.831 |
100 |
0.518 |
| cinA | Streptococcus pneumoniae R6 |
50.831 |
100 |
0.518 |
| cinA | Streptococcus pneumoniae D39 |
50.594 |
100 |
0.516 |
| cinA | Streptococcus mutans UA159 |
51.202 |
100 |
0.516 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
44.417 |
99.758 |
0.443 |
| cinA | Streptococcus suis isolate S10 |
41.534 |
91.525 |
0.38 |