Detailed information NTG1141725

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: DQL20_RS02260
• Genome accession: NZ_LS483444
• Coordinates: 400071..401570 (+)
• Length: 499 a.a.
• NCBI ID: WP_006594956.1
• Uniprot ID: -
• Organism: Streptococcus australis strain NCTC13166
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 395071..406570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL20_RS02250 (NCTC11371_00444)	amiA3	395865..397829 (+)	1965	WP_006594958.1	peptide ABC transporter substrate-binding protein	Regulator
DQL20_RS02255 (NCTC11371_00445)	amiA3	398021..400006 (+)	1986	WP_006594957.1	peptide ABC transporter substrate-binding protein	Regulator
DQL20_RS02260 (NCTC11371_00446)	amiC	400071..401570 (+)	1500	WP_006594956.1	ABC transporter permease	Regulator
DQL20_RS02265 (NCTC11371_00447)	amiD	401570..402496 (+)	927	WP_006594955.1	oligopeptide ABC transporter permease OppC	Regulator
DQL20_RS02270 (NCTC11371_00448)	amiE	402508..403575 (+)	1068	WP_006594954.1	ABC transporter ATP-binding protein	Regulator
DQL20_RS02275 (NCTC11371_00449)	amiF	403585..404508 (+)	924	WP_006594953.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55663.87 Da
• Isoelectric Point: 10.0093

>NTDB_id=1141725 DQL20_RS02260 WP_006594956.1 400071..401570(+) (amiC) [Streptococcus australis strain NCTC13166]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTLTPRNLIFKNDPNYNKIAKTKDSKINYENTVYDRMGYIEYLDSKALKEKAS
KEDSSVTVEPTKENEKIYKKYISNLGNGWVLKRFPENKGFYATREVPVFERVIGFYGNLIQIDHPNVIKDASNPKLERYI
RIENDPAIGWSVVGSGTKHKYLLYFNGQFPFIHQNFVSLNLGESYPTYSNTPVLQVITQGQGTTKKSEVNFPTGKKESSI
NIYSRTYKSPSKADAQDIARFGEGDAYTATLSNYENPSMIVSSAIIGLIGIAIAYLIAIPLGSYMALLKNTWFDSASTAT
LTFMMSLPTIALVYIVRLAGSSIGLPDSFPVLGAQDWRSYVLPSVILGLLSAPGLAVWIRRYMIDLHSQDFVRFARAKGL
SEKEISRKHIFKNAMVPIVTGIPVQLVLVISGATLTETVFAFPGMGKMLIDSIKASNNTMVVGLVFIFTVLAVFGAMAGD
ILMVMVDPRIKLTTKKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=1141725 DQL20_RS02260 WP_006594956.1 400071..401570(+) (amiC) [Streptococcus australis strain NCTC13166]
ATGAAAAAATATATATTTATGCGTATTTTGCGTTCGTTAGTGTCGATCTTTTTGGTTACGACATTGACCTATACAATTAT
TTATACGCTAACCCCAAGAAATTTAATTTTCAAAAACGACCCTAACTATAATAAGATTGCAAAGACTAAGGATTCTAAAA
TCAATTATGAAAACACAGTCTATGATCGTATGGGGTATATAGAATATCTTGATTCAAAAGCTTTGAAAGAAAAAGCAAGC
AAGGAAGACTCATCAGTAACTGTAGAGCCTACTAAAGAAAACGAAAAGATCTACAAAAAGTACATTTCTAATCTTGGAAA
TGGCTGGGTATTGAAACGTTTCCCTGAAAACAAAGGCTTTTACGCAACTCGTGAAGTCCCTGTCTTTGAACGTGTTATTG
GATTCTACGGCAACCTGATTCAGATTGATCATCCAAATGTCATCAAAGATGCTTCAAATCCAAAACTTGAACGCTATATT
CGCATTGAAAATGATCCAGCTATTGGTTGGTCAGTAGTTGGTTCGGGGACTAAACATAAATATCTTTTGTATTTCAATGG
TCAATTCCCGTTCATTCATCAAAATTTTGTATCGTTAAACTTGGGTGAATCTTATCCAACTTATTCAAATACGCCAGTTC
TTCAGGTTATTACACAAGGACAAGGTACGACTAAGAAGAGTGAAGTAAACTTCCCAACAGGGAAAAAAGAATCTTCTATC
AACATCTACTCACGTACATACAAATCACCAAGCAAGGCAGATGCCCAAGATATTGCCCGCTTTGGTGAAGGCGATGCTTA
TACAGCAACATTGAGCAACTATGAAAATCCATCTATGATTGTCAGCTCAGCCATTATTGGTTTGATCGGGATTGCGATTG
CTTACTTGATTGCTATTCCTTTAGGATCTTATATGGCCTTGTTGAAGAATACTTGGTTTGATAGTGCTTCTACGGCAACA
TTAACATTTATGATGTCATTGCCAACGATTGCCTTGGTCTACATCGTTCGCTTGGCGGGTTCTTCTATCGGCTTACCGGA
TTCCTTCCCAGTCTTAGGGGCTCAGGATTGGCGCTCTTATGTACTGCCTTCTGTGATTTTGGGTCTTTTGAGTGCACCGG
GATTGGCAGTTTGGATTCGCCGTTACATGATCGATTTGCATTCTCAAGACTTTGTCCGTTTTGCACGTGCCAAAGGGCTT
TCTGAGAAAGAAATTTCACGCAAGCATATCTTTAAAAACGCTATGGTTCCGATCGTTACAGGGATTCCTGTTCAATTGGT
TCTAGTCATCTCTGGGGCAACATTGACAGAAACTGTCTTTGCCTTCCCTGGTATGGGTAAAATGTTGATTGATTCTATCA
AAGCATCCAATAATACCATGGTGGTCGGCCTTGTCTTCATCTTTACTGTTCTTGCTGTATTTGGAGCAATGGCTGGGGAT
ATCCTTATGGTTATGGTAGACCCTCGTATCAAATTGACAACTAAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	72.745	100	0.727
amiC	Streptococcus thermophilus LMD-9	72.345	100	0.723
amiC	Streptococcus thermophilus LMG 18311	72.345	100	0.723