Detailed information NTG1141728

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQL20_RS02275
• Genome accession: NZ_LS483444
• Coordinates: 403585..404508 (+)
• Length: 307 a.a.
• NCBI ID: WP_006594953.1
• Uniprot ID: E7S7G6
• Organism: Streptococcus australis strain NCTC13166
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 398585..409508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL20_RS02260 (NCTC11371_00446)	amiC	400071..401570 (+)	1500	WP_006594956.1	ABC transporter permease	Regulator
DQL20_RS02265 (NCTC11371_00447)	amiD	401570..402496 (+)	927	WP_006594955.1	oligopeptide ABC transporter permease OppC	Regulator
DQL20_RS02270 (NCTC11371_00448)	amiE	402508..403575 (+)	1068	WP_006594954.1	ABC transporter ATP-binding protein	Regulator
DQL20_RS02275 (NCTC11371_00449)	amiF	403585..404508 (+)	924	WP_006594953.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34823.96 Da
• Isoelectric Point: 6.3189

>NTDB_id=1141728 DQL20_RS02275 WP_006594953.1 403585..404508(+) (amiF) [Streptococcus australis strain NCTC13166]
MTEKLIEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYNGKKINGKQSRK
DESELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFENEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=1141728 DQL20_RS02275 WP_006594953.1 403585..404508(+) (amiF) [Streptococcus australis strain NCTC13166]
ATGACAGAAAAATTAATAGAAGTTAAAGATCTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTTGTAGCTGTAAAGAA
TGCAAATTTTTTCATCAATAAAGGTGAAACATTCTCTCTTGTTGGTGAGTCAGGTAGTGGGAAGACGACGATTGGTCGTG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGATATTCTATATAATGGTAAAAAGATCAATGGGAAGCAATCACGCAAG
GATGAAAGTGAATTAATCCGTAAGATTCAAATGATCTTCCAAGACCCGGCAGCGAGTTTGAATGAACGTGCAACAGTCGA
CTACATAATTTCAGAAGGTTTGTACAATTATCACCTATTCGAAAATGAAGAAGACCGAGTACGTAAAGTAAAAGAGATTA
TGCATGAAGTGGGGCTTCTAGCAGAGCATTTGACTCGTTATCCTCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGG
ATTGCTCGTGCCTTGGTAATGGAACCAGAATTTGTTATCGCAGACGAGCCAATTTCAGCTCTTGACGTATCAGTACGTGC
TCAAGTTTTAAATCTCCTTAAGAAATTCCAAAAAGAATTGGGCTTGACCTATCTCTTTATCGCACACGATCTTTCGGTAG
TTCGATTTATCTCTGATCGTATTGCGGTTATTTACAAAGGAGTTATTGTAGAAGTAGCTGAGACAGAAGAATTGTTCAAC
AATCCAATTCATCCATACACACAATCTCTACTATCAGCTGTACCGATTCCAGATCCAATTCTAGAACGCAAAAAAGTTCT
GAAAGTTTATGATCCAGATCAGCATGATTATTCAACCGACAAACCAGAAATGGTTGAAATCAAACCTGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: E7S7G6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	83.934	99.349	0.834
amiF	Streptococcus thermophilus LMG 18311	83.607	99.349	0.831
amiF	Streptococcus thermophilus LMD-9	83.279	99.349	0.827