Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | DQN21_RS00710 | Genome accession | NZ_LS483409 |
| Coordinates | 103088..103990 (+) | Length | 300 a.a. |
| NCBI ID | WP_077495929.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus strain NCTC13773 | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98088..108990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN21_RS00670 (NCTC13773_00134) | comYF | 98182..98649 (+) | 468 | WP_012961330.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQN21_RS00675 (NCTC13773_00135) | comGG | 98603..98953 (+) | 351 | WP_420031090.1 | competence type IV pilus minor pilin ComGG | - |
| DQN21_RS00680 (NCTC13773_00136) | comYH | 99008..99964 (+) | 957 | WP_009853236.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQN21_RS00685 (NCTC13773_00137) | - | 100017..101216 (+) | 1200 | WP_061458770.1 | acetate kinase | - |
| DQN21_RS00690 (NCTC13773_00138) | - | 101378..101578 (+) | 201 | WP_012961332.1 | helix-turn-helix transcriptional regulator | - |
| DQN21_RS00700 (NCTC13773_00139) | - | 101810..102262 (+) | 453 | WP_061458772.1 | hypothetical protein | - |
| DQN21_RS00705 (NCTC13773_00140) | - | 102274..102909 (+) | 636 | WP_077495927.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQN21_RS00710 (NCTC13773_00141) | comR | 103088..103990 (+) | 903 | WP_077495929.1 | helix-turn-helix domain-containing protein | Regulator |
| DQN21_RS00715 (NCTC13773_00142) | purD | 104447..105709 (+) | 1263 | WP_009853192.1 | phosphoribosylamine--glycine ligase | - |
| DQN21_RS00720 (NCTC13773_00143) | - | 105699..106148 (+) | 450 | WP_012961319.1 | DUF523 domain-containing protein | - |
| DQN21_RS00725 (NCTC13773_00144) | purE | 106148..106636 (+) | 489 | WP_061458775.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| DQN21_RS00730 (NCTC13773_00145) | purK | 106623..107714 (+) | 1092 | WP_077495931.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| DQN21_RS00735 (NCTC13773_00146) | - | 107734..107958 (+) | 225 | WP_061458915.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 35172.13 Da Isoelectric Point: 4.7562
>NTDB_id=1140541 DQN21_RS00710 WP_077495929.1 103088..103990(+) (comR) [Streptococcus gallolyticus strain NCTC13773]
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLGRKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVNRKQLFNINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLGRKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVNRKQLFNINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
Nucleotide
Download Length: 903 bp
>NTDB_id=1140541 DQN21_RS00710 WP_077495929.1 103088..103990(+) (comR) [Streptococcus gallolyticus strain NCTC13773]
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGACTGGGACGTAAGGGAGAATACTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAGGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAACCGAAAACAATTGTTTAACATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGACTGGGACGTAAGGGAGAATACTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAGGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAACCGAAAACAATTGTTTAACATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus infantarius subsp. infantarius ATCC BAA-102 |
83.624 |
95.667 |
0.8 |
| comR | Streptococcus mutans UA159 |
51.839 |
99.667 |
0.517 |
| comR | Streptococcus pyogenes MGAS8232 |
50.993 |
100 |
0.513 |
| comR | Streptococcus pyogenes MGAS315 |
45.973 |
99.333 |
0.457 |
| comR | Streptococcus suis P1/7 |
37.667 |
100 |
0.377 |
| comR | Streptococcus suis 05ZYH33 |
37.667 |
100 |
0.377 |
| comR | Streptococcus suis D9 |
36.333 |
100 |
0.363 |