Detailed information NTG1136181

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DQM44_RS00725
• Genome accession: NZ_LS483318
• Coordinates: 118997..119323 (+)
• Length: 108 a.a.
• NCBI ID: WP_003055259.1
• Uniprot ID: A0A9X8T184
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 113997..124323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS00710 (NCTC5370_00147)	-	116641..117006 (+)	366	WP_003055257.1	DUF1033 family protein	-
DQM44_RS00715 (NCTC5370_00148)	comGA/cglA	117087..118028 (+)	942	WP_003062163.1	competence type IV pilus ATPase ComGA	Machinery gene
DQM44_RS00720 (NCTC5370_00149)	comYB	117964..118995 (+)	1032	WP_015057201.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQM44_RS00725 (NCTC5370_00150)	comYC	118997..119323 (+)	327	WP_003055259.1	competence type IV pilus major pilin ComGC	Machinery gene
DQM44_RS00730 (NCTC5370_00151)	comGD	119298..119726 (+)	429	WP_014611932.1	competence type IV pilus minor pilin ComGD	-
DQM44_RS00735 (NCTC5370_00152)	comGE	119734..119979 (+)	246	WP_003058569.1	competence type IV pilus minor pilin ComGE	-
DQM44_RS00740 (NCTC5370_00153)	comGF	119960..120400 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	-
DQM44_RS00745 (NCTC5370_00154)	comGG	120429..120752 (+)	324	WP_227985720.1	competence type IV pilus minor pilin ComGG	-
DQM44_RS00750 (NCTC5370_00155)	comYH	120815..121768 (+)	954	WP_022554118.1	class I SAM-dependent methyltransferase	Machinery gene
DQM44_RS00755 (NCTC5370_00156)	-	121827..123023 (+)	1197	WP_003058485.1	acetate kinase	-
DQM44_RS00760 (NCTC5370_00157)	-	123329..123535 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
DQM44_RS00765 (NCTC5370_00158)	-	123638..124318 (+)	681	WP_003060329.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12384.38 Da
• Isoelectric Point: 9.6412

>NTDB_id=1136181 DQM44_RS00725 WP_003055259.1 118997..119323(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSQLKT
DGSITDKQVKAYTDYYGKHRDETQKLQP

Nucleotide

• Length: 327 bp

>NTDB_id=1136181 DQM44_RS00725 WP_003055259.1 118997..119323(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTAATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTAAGTCAATTAAAGACT
GATGGCAGTATTACAGATAAGCAGGTAAAAGCTTACACAGACTATTATGGAAAACACAGAGATGAGACTCAAAAACTGCA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	60.194	95.37	0.574
comGC/cglC	Streptococcus mitis SK321	53.774	98.148	0.528
comGC	Lactococcus lactis subsp. cremoris KW2	54.369	95.37	0.519
comGC/cglC	Streptococcus mitis NCTC 12261	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae D39	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae R6	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	51.402	99.074	0.509
comYC	Streptococcus mutans UA140	53.465	93.519	0.5
comYC	Streptococcus mutans UA159	53.465	93.519	0.5
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417