Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   E0F31_RS11035 Genome accession   NZ_LR216064
Coordinates   2049686..2050867 (+) Length   393 a.a.
NCBI ID   WP_000681598.1    Uniprot ID   A0A0B7M448
Organism   Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6     
Function   degrading CSP; selective degradation of ComEA and ComEC (predicted from homology)   
Competence regulation

Genomic Context


Location: 2044686..2055867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F31_RS10995 (SAMEA3714520_02078) - 2045737..2046279 (+) 543 WP_001158263.1 TetR/AcrR family transcriptional regulator -
  E0F31_RS11010 (SAMEA3714520_02081) comE 2046522..2047274 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  E0F31_RS11015 (SAMEA3714520_02082) comD/comD2 2047271..2048596 (-) 1326 WP_001842237.1 competence system sensor histidine kinase ComD Regulator
  E0F31_RS11020 (SAMEA3714520_02083) comC/comC2 2048617..2048742 (-) 126 WP_000799686.1 competence-stimulating peptide ComC Regulator
  E0F31_RS11030 (SAMEA3714520_02085) rlmH 2049024..2049503 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E0F31_RS11035 (SAMEA3714520_02086) htrA 2049686..2050867 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  E0F31_RS11040 (SAMEA3714520_02087) spo0J 2050925..2051683 (+) 759 WP_050104049.1 ParB/RepB/Spo0J family partition protein Regulator
  E0F31_RS11045 (SAMEA3714520_02088) dnaA 2051896..2053257 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  E0F31_RS11050 (SAMEA3714520_02089) dnaN 2053416..2054552 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  E0F31_RS11055 (SAMEA3714520_02090) - 2054617..2054811 (+) 195 WP_000285194.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41827.69 Da        Isoelectric Point: 6.8902

>NTDB_id=1126313 E0F31_RS11035 WP_000681598.1 2049686..2050867(+) (htrA) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
MKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSA
NRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISS
EKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVV
VRSVQSNMPANGHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKSSGDLES

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=1126313 E0F31_RS11035 WP_000681598.1 2049686..2050867(+) (htrA) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
ATGAAACATCTAAAAACATTTTACAAAAAATGGTTTCAATTATTAGTCGTTATCGTCATTAGCTTTTTTAGTGGAGCCTT
GGGTAGTTTTTCAATAACTCAACTAACTCAAAAAAGTAGTGTAAACAACTCTAACAACAATAGTACTATTACACAAACTG
CCTATAAGAACGAAAATTCAACAACACAGGCTGTTAACAAAGTAAAAGATGCTGTTGTTTCTGTTATTACTTATTCGGCA
AACAGACAAAATAGCGTATTTGGCAATGATGATACTGACACAGATTCTCAGCGAATCTCTAGTGAAGGATCTGGAGTTAT
TTATAAAAAGAATGATAAAGAAGCTTACATCGTCACCAACAATCACGTTATAAATGGCGCCAGCAAAGTAGATATTCGAT
TGTCAGATGGGACTAAAGTACCTGGAGAAATTGTCGGAGCTGACACTTTCTCTGATATTGCTGTCGTAAAAATCTCTTCA
GAAAAAGTGACAACAGTAGCTGAGTTTGGTGATTCTAGTAAGTTAACTGTAGGAGAAACTGCTATTGCCATCGGTAGCCC
GTTAGGTTCTGAATATGCAAATACTGTCACTCAAGGTATCGTATCCAGTCTCAATAGAAATGTATCCTTAAAATCGGAAG
ATGGACAAGCTATTTCTACAAAAGCCATCCAAACTGATACTGCTATTAACCCAGGTAACTCTGGCGGCCCACTGATCAAT
ATTCAAGGGCAGGTTATCGGAATTACCTCAAGTAAAATTGCTACAAATGGAGGAACATCTGTAGAAGGTCTTGGTTTCGC
AATTCCTGCAAATGATGCTATCAATATTATTGAACAGTTAGAAAAAAACGGAAAAGTGACGCGTCCAGCTTTGGGAATCC
AGATGGTTAATTTATCTAATGTGAGTACAAGCGACATCAGAAGACTCAATATTCCAAGTAATGTTACATCTGGTGTAGTT
GTTCGTTCGGTACAAAGTAATATGCCTGCCAATGGTCACCTTGAAAAATACGATGTAATTACAAAAGTAGATGACAAAGA
GATTGCTTCATCAACAGACTTACAAAGTGCTCTTTACAACCATTCTATCGGAGACACCATTAAGATAACCTACTATCGTA
ACGGGAAAGAAGAAACTACCTCTATCAAACTTAACAAGAGTTCAGGTGATTTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7M448

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus pneumoniae Rx1

99.746

100

0.997

  htrA Streptococcus pneumoniae D39

99.746

100

0.997

  htrA Streptococcus pneumoniae R6

99.746

100

0.997

  htrA Streptococcus pneumoniae TIGR4

99.746

100

0.997

  htrA Streptococcus mitis NCTC 12261

97.455

100

0.975

  htrA Streptococcus gordonii str. Challis substr. CH1

66.667

100

0.672

  htrA Streptococcus mutans UA159

54.822

100

0.55


Multiple sequence alignment