Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   E0F31_RS11040 Genome accession   NZ_LR216064
Coordinates   2050925..2051683 (+) Length   252 a.a.
NCBI ID   WP_050104049.1    Uniprot ID   A0A6I3UV41
Organism   Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2045925..2056683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F31_RS11010 (SAMEA3714520_02081) comE 2046522..2047274 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  E0F31_RS11015 (SAMEA3714520_02082) comD/comD2 2047271..2048596 (-) 1326 WP_001842237.1 competence system sensor histidine kinase ComD Regulator
  E0F31_RS11020 (SAMEA3714520_02083) comC/comC2 2048617..2048742 (-) 126 WP_000799686.1 competence-stimulating peptide ComC Regulator
  E0F31_RS11030 (SAMEA3714520_02085) rlmH 2049024..2049503 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E0F31_RS11035 (SAMEA3714520_02086) htrA 2049686..2050867 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  E0F31_RS11040 (SAMEA3714520_02087) spo0J 2050925..2051683 (+) 759 WP_050104049.1 ParB/RepB/Spo0J family partition protein Regulator
  E0F31_RS11045 (SAMEA3714520_02088) dnaA 2051896..2053257 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  E0F31_RS11050 (SAMEA3714520_02089) dnaN 2053416..2054552 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  E0F31_RS11055 (SAMEA3714520_02090) - 2054617..2054811 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  E0F31_RS11060 (SAMEA3714520_02091) ychF 2054895..2056010 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  E0F31_RS11065 (SAMEA3714520_02092) pth 2056081..2056650 (+) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29139.47 Da        Isoelectric Point: 9.0667

>NTDB_id=1126314 E0F31_RS11040 WP_050104049.1 2050925..2051683(+) (spo0J) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNDEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1126314 E0F31_RS11040 WP_050104049.1 2050925..2051683(+) (spo0J) [Streptococcus pneumoniae strain GPSC13 substr. ST473 isolate 569492b0-41bd-11e5-998e-3c4a9275d6c6]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGATGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I3UV41

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment