Detailed information NTG1120878

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EL115_RS02435
• Genome accession: NZ_LR134307
• Coordinates: 476402..477016 (+)
• Length: 204 a.a.
• NCBI ID: WP_269471066.1
• Uniprot ID: -
• Organism: Streptococcus milleri strain NCTC10708
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 471402..482016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL115_RS02425 (NCTC10708_00491)	mgtA	472932..475586 (+)	2655	WP_126441226.1	magnesium-translocating P-type ATPase	-
EL115_RS02430 (NCTC10708_00492)	upp	475684..476313 (+)	630	WP_003025639.1	uracil phosphoribosyltransferase	-
EL115_RS02435 (NCTC10708_00493)	clpP	476402..477016 (+)	615	WP_269471066.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EL115_RS02440 (NCTC10708_00494)	-	477107..477376 (+)	270	WP_037592505.1	DUF2129 domain-containing protein	-
EL115_RS02445 (NCTC10708_00495)	-	477459..478622 (+)	1164	WP_115262932.1	ABC transporter substrate-binding protein	-
EL115_RS02450 (NCTC10708_00496)	-	479005..479874 (+)	870	WP_126441227.1	branched-chain amino acid ABC transporter permease	-
EL115_RS02455 (NCTC10708_00497)	-	479878..480828 (+)	951	WP_126441228.1	branched-chain amino acid ABC transporter permease	-
EL115_RS02460 (NCTC10708_00498)	-	480828..481592 (+)	765	WP_126441229.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22436.59 Da
• Isoelectric Point: 4.6199

>NTDB_id=1120878 EL115_RS02435 WP_269471066.1 476402..477016(+) (clpP) [Streptococcus milleri strain NCTC10708]
MSDEKENIMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGAVEDNMANSIIAQLLFLDAQDSTKDIYLYINTPGGSVSAG
LAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEK
ILADNSGKTVKQVHKDAERDYWMSAQETLDYGFIDEIMANNNLN

Nucleotide

• Length: 615 bp

>NTDB_id=1120878 EL115_RS02435 WP_269471066.1 476402..477016(+) (clpP) [Streptococcus milleri strain NCTC10708]
ATATCAGATGAAAAGGAGAATATAATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGGGAACGCTCGTACGATATTTA
CTCACGCCTTTTAAAAGATCGTATTATTATGCTCACTGGAGCGGTTGAAGATAACATGGCCAATTCCATTATTGCCCAAT
TGCTTTTCCTAGACGCTCAAGATAGTACAAAGGATATTTATCTTTATATCAATACACCAGGAGGTTCTGTATCGGCGGGT
CTAGCGATTGTCGATACAATGAACTTCATCAAATCAGATGTTCAAACAATTGTCATGGGAATGGCTGCGTCCATGGGAAC
CATCATCGCTTCAAGTGGTGCTAAAGGCAAACGCTTTATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTG
GAACTGGTGGCGGTACGCAACAAACCGATATGGCGATTGCTGCTGAACATTTGCTGAAAACTCGAAACAATTTGGAAAAA
ATTCTTGCAGATAACTCTGGTAAGACCGTTAAGCAAGTTCATAAAGATGCTGAACGTGACTACTGGATGAGTGCTCAAGA
AACGCTAGATTATGGTTTCATTGATGAAATTATGGCAAATAACAACTTGAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	91.837	96.078	0.882
clpP	Streptococcus pneumoniae R6	91.837	96.078	0.882
clpP	Streptococcus pneumoniae TIGR4	91.837	96.078	0.882
clpP	Streptococcus pneumoniae D39	91.837	96.078	0.882
clpP	Streptococcus thermophilus LMG 18311	91.795	95.588	0.877
clpP	Streptococcus thermophilus LMD-9	91.795	95.588	0.877
clpP	Streptococcus pyogenes MGAS315	91.282	95.588	0.873
clpP	Streptococcus pyogenes JRS4	91.282	95.588	0.873
clpP	Streptococcus mutans UA159	91.282	95.588	0.873
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.128	95.588	0.814
clpP	Lactococcus lactis subsp. cremoris KW2	84.615	95.588	0.809
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.247	95.098	0.554
clpP	Bacillus subtilis subsp. subtilis str. 168	57.812	94.118	0.544