Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ELZ63_RS02015 | Genome accession | NZ_LR134171 |
| Coordinates | 394489..394938 (+) | Length | 149 a.a. |
| NCBI ID | WP_065244998.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain NCTC12699 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 389489..399938
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ63_RS01995 (NCTC12699_00399) | rsmE | 389950..390687 (-) | 738 | WP_065245002.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| ELZ63_RS02000 (NCTC12699_00400) | lnt | 390737..392266 (-) | 1530 | WP_080474365.1 | apolipoprotein N-acyltransferase | - |
| ELZ63_RS02005 (NCTC12699_00401) | corC | 392289..393188 (-) | 900 | WP_065245000.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| ELZ63_RS02010 (NCTC12699_00402) | ampD | 393820..394374 (-) | 555 | WP_065244999.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| ELZ63_RS02015 (NCTC12699_00403) | pilA | 394489..394938 (+) | 450 | WP_065244998.1 | prepilin peptidase-dependent pilin | Machinery gene |
| ELZ63_RS02020 (NCTC12699_00404) | pilB | 394935..396332 (+) | 1398 | WP_065244997.1 | GspE/PulE family protein | Machinery gene |
| ELZ63_RS02025 (NCTC12699_00405) | pilC | 396329..397549 (+) | 1221 | WP_065244996.1 | type II secretion system F family protein | Machinery gene |
| ELZ63_RS02030 (NCTC12699_00406) | pilD | 397546..398238 (+) | 693 | WP_065244995.1 | A24 family peptidase | Machinery gene |
| ELZ63_RS02035 (NCTC12699_00407) | rho | 398291..399553 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15364.58 Da Isoelectric Point: 8.0922
>NTDB_id=1118734 ELZ63_RS02015 WP_065244998.1 394489..394938(+) (pilA) [Haemophilus influenzae strain NCTC12699]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKSDVELCVYSTGTPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLDGMSYTLTAEGDSAKGVTWKTTCGTTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKSDVELCVYSTGTPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLDGMSYTLTAEGDSAKGVTWKTTCGTTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1118734 ELZ63_RS02015 WP_065244998.1 394489..394938(+) (pilA) [Haemophilus influenzae strain NCTC12699]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCGTCTGCGC
CTTATAAGTCAGATGTGGAATTATGCGTTTATAGCACAGGCACACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACAGTAAAAGGTAATGGTAC
ATTAGATGGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGTGGCACAA
CGGATGCCTCTTTATTTCCTGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCGTCTGCGC
CTTATAAGTCAGATGTGGAATTATGCGTTTATAGCACAGGCACACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACAGTAAAAGGTAATGGTAC
ATTAGATGGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGTGGCACAA
CGGATGCCTCTTTATTTCCTGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
83.893 |
100 |
0.839 |
| pilA | Haemophilus influenzae 86-028NP |
82.55 |
100 |
0.826 |
| pilA | Glaesserella parasuis strain SC1401 |
57.718 |
100 |
0.577 |
| comP | Acinetobacter baylyi ADP1 |
41.216 |
99.329 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.541 |
99.329 |
0.403 |
| pilA2 | Legionella pneumophila str. Paris |
41.429 |
93.96 |
0.389 |