Detailed information NTG1118737

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ELZ63_RS02030
• Genome accession: NZ_LR134171
• Coordinates: 397546..398238 (+)
• Length: 230 a.a.
• NCBI ID: WP_065244995.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC12699
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 392546..403238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ63_RS02010 (NCTC12699_00402)	ampD	393820..394374 (-)	555	WP_065244999.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ELZ63_RS02015 (NCTC12699_00403)	pilA	394489..394938 (+)	450	WP_065244998.1	prepilin peptidase-dependent pilin	Machinery gene
ELZ63_RS02020 (NCTC12699_00404)	pilB	394935..396332 (+)	1398	WP_065244997.1	GspE/PulE family protein	Machinery gene
ELZ63_RS02025 (NCTC12699_00405)	pilC	396329..397549 (+)	1221	WP_065244996.1	type II secretion system F family protein	Machinery gene
ELZ63_RS02030 (NCTC12699_00406)	pilD	397546..398238 (+)	693	WP_065244995.1	A24 family peptidase	Machinery gene
ELZ63_RS02035 (NCTC12699_00407)	rho	398291..399553 (-)	1263	WP_005648966.1	transcription termination factor Rho	-
ELZ63_RS02040 (NCTC12699_00408)	metJ	399801..400118 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
ELZ63_RS02045 (NCTC12699_00409)	cueR	400132..400518 (-)	387	WP_005648963.1	Cu(I)-responsive transcriptional regulator	-
ELZ63_RS02050 (NCTC12699_00410)	-	400595..400801 (+)	207	WP_065244994.1	heavy-metal-associated domain-containing protein	-
ELZ63_RS02055 (NCTC12699_00411)	-	400876..401082 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-
ELZ63_RS02060 (NCTC12699_00412)	-	401156..401362 (+)	207	WP_005648955.1	heavy-metal-associated domain-containing protein	-
ELZ63_RS02065 (NCTC12699_00413)	-	401448..401654 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-
ELZ63_RS02070 (NCTC12699_00414)	-	401740..401946 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26673.65 Da
• Isoelectric Point: 8.9257

>NTDB_id=1118737 ELZ63_RS02030 WP_065244995.1 397546..398238(+) (pilD) [Haemophilus influenzae strain NCTC12699]
MIYFTMFLLGGILGIALWFYLSGFITHLQQEIYATYVELFPQNSSPFQPHFASIQQKKCGHILRYFLSVGVGFIFLQIAF
KDSIFTVWIGLTLIILWTISYLDWHYQLISTTPCLWLLTLGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKCYYR
KEAFGRGDYWLAMALGSFIRLETLPHFLLLASVLGICFSLIHKKKKEFIPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=1118737 ELZ63_RS02030 WP_065244995.1 397546..398238(+) (pilD) [Haemophilus influenzae strain NCTC12699]
ATGATTTACTTCACAATGTTTTTATTAGGCGGTATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACGCA
TTTGCAGCAAGAGATTTATGCGACTTACGTTGAATTATTTCCACAAAACAGTTCTCCATTTCAACCGCACTTTGCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTAAGTGTTGGAGTTGGATTTATATTTTTACAAATTGCCTTC
AAAGATTCTATTTTTACTGTATGGATCGGACTCACACTTATTATTCTTTGGACAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACGACACCCTGTTTATGGTTACTTACTCTAGGATTATTTGGAGCAGACAATAACTTTTCATTGCTAACGT
TATCTGAAAGCATAAAAAGTGCGGCTAGTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATGTTATTACAGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCGTTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTGCTTGGAATATGTTTTTCGCTTATTCATAAAAAGAAAAAAGAATTTATACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	97.826	100	0.978
pilD	Haemophilus influenzae Rd KW20	94.348	100	0.943