Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   ELZ51_RS10630 Genome accession   NZ_LR134094
Coordinates   2114671..2115942 (-) Length   423 a.a.
NCBI ID   WP_126427494.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   require for competence (predicted from homology)   
Unclear

Genomic Context

Location: 2109671..2120942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10600 (NCTC4669_02234) - 2109761..2111323 (-) 1563 WP_126427490.1 DUF2079 domain-containing protein -
  ELZ51_RS10605 (NCTC4669_02236) - 2111667..2111972 (-) 306 WP_003053101.1 DUF1292 domain-containing protein -
  ELZ51_RS10610 (NCTC4669_02237) ruvX 2111983..2112402 (-) 420 WP_126427492.1 Holliday junction resolvase RuvX -
  ELZ51_RS10615 (NCTC4669_02238) - 2112399..2112668 (-) 270 WP_003045720.1 IreB family regulatory phosphoprotein -
  ELZ51_RS10620 (NCTC4669_02239) spx 2112780..2113178 (-) 399 WP_003053105.1 transcriptional regulator Spx -
  ELZ51_RS10625 (NCTC4669_02240) recA 2113477..2114613 (-) 1137 WP_115245519.1 recombinase RecA Machinery gene
  ELZ51_RS10630 (NCTC4669_02241) cinA 2114671..2115942 (-) 1272 WP_126427494.1 competence/damage-inducible protein A Machinery gene
  ELZ51_RS10635 (NCTC4669_02242) - 2116066..2116406 (-) 341 Protein_2051 VOC family protein -
  ELZ51_RS10640 (NCTC4669_02243) - 2116409..2116981 (-) 573 WP_126427496.1 DNA-3-methyladenine glycosylase I -
  ELZ51_RS10645 (NCTC4669_02244) ruvA 2116991..2117584 (-) 594 WP_003053113.1 Holliday junction branch migration protein RuvA -
  ELZ51_RS10650 (NCTC4669_02245) - 2117586..2118806 (-) 1221 WP_003053115.1 MDR family MFS transporter -
  ELZ51_RS10655 (NCTC4669_02246) mutL 2118817..2120799 (-) 1983 WP_126427650.1 DNA mismatch repair endonuclease MutL -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45968.39 Da        Isoelectric Point: 4.7599

>NTDB_id=1118306 ELZ51_RS10630 WP_126427494.1 2114671..2115942(-) (cinA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MKAELIAVGTEILTGQIVNTNAQFLSEKMAELGIDVYFQTAVGDNEERLLSVIATASQRSDLVILCGGLGPTEDDLTKQT
LAKYLNRDLVFEEEASQKLDDFYASRKESSRTANNAKQAQIIAGSSPLQNRTGLAVGGLITVNKVTYVVLPGPPSELKPM
VNEELLPLLSTQSRKLYSRVLRFFGIGESQLVTVLSDLIENQTDPTIAPYAKTGEVTLRLSTKAENQTLADTKLDQLEAQ
LLSRKTPDNQSLSDFLYGYREDNSLAREVFELLVKYDKTITAAESLTAGLFQSTLASFPGASQVFNGGFVTYSMEEKAKM
LGIPLEDLTSYGVVSAYTAEKMAEQARLLTGADIGVSLTGVAGPDMLENQPAGTVFIGLATQNKVESMKVLIGGRSRSDV
RHIATLHAFNMVHKTLLKPENLL

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=1118306 ELZ51_RS10630 WP_126427494.1 2114671..2115942(-) (cinA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAAAGCTGAACTGATTGCAGTAGGTACCGAAATTTTGACTGGTCAAATTGTGAATACTAATGCTCAATTTCTGTCGGA
AAAAATGGCAGAGCTAGGTATTGATGTCTATTTTCAAACGGCTGTTGGGGACAACGAGGAGCGTTTACTTTCAGTGATTG
CAACTGCTAGTCAGCGGAGTGATTTGGTCATTTTATGTGGTGGTCTTGGCCCCACAGAAGATGATTTAACCAAGCAGACT
TTAGCAAAATACCTTAATAGAGATTTGGTCTTTGAAGAAGAAGCTAGTCAAAAATTAGACGATTTTTATGCCAGTCGTAA
AGAGTCGTCTCGAACGGCAAATAATGCTAAGCAGGCTCAGATCATTGCTGGTTCAAGCCCTCTGCAAAATAGAACAGGAC
TCGCAGTGGGGGGCTTAATCACTGTTAATAAGGTGACTTATGTTGTTTTACCAGGGCCGCCAAGTGAATTAAAACCTATG
GTTAATGAGGAACTGCTTCCTCTTTTGTCCACACAATCTCGCAAACTTTACTCGAGAGTCTTACGATTTTTTGGGATTGG
TGAGAGTCAGCTGGTGACGGTCTTATCAGACCTTATTGAGAATCAAACTGACCCTACCATTGCACCTTATGCCAAAACTG
GTGAAGTGACCCTTCGTTTATCAACGAAAGCTGAAAATCAAACATTAGCAGATACGAAATTAGATCAACTAGAAGCGCAG
CTATTGTCGCGAAAAACTCCTGACAACCAGTCGTTATCAGATTTTCTTTATGGCTATAGAGAGGATAATTCCTTAGCGCG
TGAGGTATTTGAGCTCTTAGTAAAATATGATAAGACAATTACAGCAGCAGAAAGTCTAACCGCGGGATTATTTCAGTCAA
CTTTGGCGAGTTTTCCAGGAGCTTCTCAAGTATTCAATGGAGGCTTTGTGACTTATAGCATGGAAGAAAAAGCGAAAATG
CTAGGCATTCCTCTAGAGGATTTGACATCGTATGGAGTTGTTAGTGCTTATACGGCTGAGAAGATGGCGGAGCAAGCAAG
ATTATTGACTGGTGCTGATATTGGGGTAAGTTTAACAGGTGTTGCCGGACCAGATATGTTGGAGAACCAGCCTGCAGGTA
CAGTTTTCATTGGTCTTGCCACTCAAAATAAGGTAGAATCAATGAAGGTTTTAATCGGGGGACGGAGCCGTTCAGATGTG
CGTCATATTGCGACTTTACATGCTTTTAATATGGTCCATAAAACTTTATTAAAACCTGAAAATTTGCTATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(178-243)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(263-416)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mutans UA159

72.104

100

0.721
  cinA Streptococcus mitis SK321

70.743

98.582

0.697
  cinA Streptococcus mitis NCTC 12261

69.784

98.582

0.688
  cinA Streptococcus pneumoniae TIGR4

68.825

98.582

0.678
  cinA Streptococcus pneumoniae Rx1

68.825

98.582

0.678
  cinA Streptococcus pneumoniae R6

68.825

98.582

0.678
  cinA Streptococcus pneumoniae D39

68.585

98.582

0.676
  cinA Streptococcus suis isolate S10

53.606

98.345

0.527
  cinA Bacillus subtilis subsp. subtilis str. 168

46.172

98.818

0.456

Multiple sequence alignment