Detailed information NTG1116459

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQB47_RS10095
• Genome accession: NZ_LR129844
• Coordinates: 1833507..1833911 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 180-15 isolate 180-15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1828507..1838911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB47_RS10060	rnpA	1828921..1829292 (-)	372	WP_000739244.1	ribonuclease P protein component	-
EQB47_RS11950	-	1829309..1829440 (-)	132	WP_000768904.1	hypothetical protein	-
EQB47_RS10065	-	1829441..1830631 (-)	1191	WP_000167765.1	acetate kinase	-
EQB47_RS10070	comYH	1830682..1831635 (-)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
EQB47_RS10075	-	1831696..1832290 (-)	595	Protein_1879	class I SAM-dependent methyltransferase	-
EQB47_RS10080	comGG/cglG	1832427..1832840 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQB47_RS10085	comGF/cglF	1832818..1833279 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQB47_RS10090	comGE/cglE	1833242..1833544 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQB47_RS10095	comGD/cglD	1833507..1833911 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQB47_RS10100	comGC/cglC	1833904..1834230 (-)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
EQB47_RS10105	comGB/cglB	1834232..1835248 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQB47_RS10110	comGA/cglA/cilD	1835196..1836137 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
EQB47_RS10115	-	1836213..1836578 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQB47_RS10120	-	1836729..1837787 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=1116459 EQB47_RS10095 WP_000588013.1 1833507..1833911(-) (comGD/cglD) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=1116459 EQB47_RS10095 WP_000588013.1 1833507..1833911(-) (comGD/cglD) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47