Detailed information NTG1116457

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: EQB47_RS10085
• Genome accession: NZ_LR129844
• Coordinates: 1832818..1833279 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250542.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 180-15 isolate 180-15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1827818..1838279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB47_RS10055	-	1828122..1828946 (-)	825	WP_001809383.1	membrane protein insertase YidC	-
EQB47_RS10060	rnpA	1828921..1829292 (-)	372	WP_000739244.1	ribonuclease P protein component	-
EQB47_RS11950	-	1829309..1829440 (-)	132	WP_000768904.1	hypothetical protein	-
EQB47_RS10065	-	1829441..1830631 (-)	1191	WP_000167765.1	acetate kinase	-
EQB47_RS10070	comYH	1830682..1831635 (-)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
EQB47_RS10075	-	1831696..1832290 (-)	595	Protein_1879	class I SAM-dependent methyltransferase	-
EQB47_RS10080	comGG/cglG	1832427..1832840 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQB47_RS10085	comGF/cglF	1832818..1833279 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQB47_RS10090	comGE/cglE	1833242..1833544 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQB47_RS10095	comGD/cglD	1833507..1833911 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQB47_RS10100	comGC/cglC	1833904..1834230 (-)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
EQB47_RS10105	comGB/cglB	1834232..1835248 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQB47_RS10110	comGA/cglA/cilD	1835196..1836137 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
EQB47_RS10115	-	1836213..1836578 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQB47_RS10120	-	1836729..1837787 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17918.53 Da
• Isoelectric Point: 9.3137

>NTDB_id=1116457 EQB47_RS10085 WP_000250542.1 1832818..1833279(-) (comGF/cglF) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=1116457 EQB47_RS10085 WP_000250542.1 1832818..1833279(-) (comGF/cglF) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTACTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae D39	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae R6	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae TIGR4	96.078	100	0.961
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909