Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABCIP7010_RS16670 | Genome accession | NZ_LN865143 |
| Coordinates | 3577410..3577895 (-) | Length | 161 a.a. |
| NCBI ID | WP_000993726.1 | Uniprot ID | A0A242SN80 |
| Organism | Acinetobacter baumannii isolate CIP70.10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3572410..3582895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABCIP7010_RS16650 (ABCIP7010_3366) | - | 3574067..3574450 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| ABCIP7010_RS16655 (ABCIP7010_3367) | - | 3574660..3574854 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABCIP7010_RS16660 (ABCIP7010_3368) | bfr | 3575100..3575564 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABCIP7010_RS16665 (ABCIP7010_3369) | - | 3575606..3577234 (-) | 1629 | WP_002015646.1 | PglL family O-oligosaccharyltransferase | - |
| ABCIP7010_RS16670 (ABCIP7010_3370) | pilA | 3577410..3577895 (-) | 486 | WP_000993726.1 | pilin | Machinery gene |
| ABCIP7010_RS16675 (ABCIP7010_3371) | - | 3578239..3578799 (-) | 561 | WP_031965531.1 | TPM domain-containing protein | - |
| ABCIP7010_RS16680 (ABCIP7010_3372) | - | 3578793..3579875 (-) | 1083 | WP_002062201.1 | YgcG family protein | - |
| ABCIP7010_RS16685 (ABCIP7010_3373) | - | 3579897..3580487 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| ABCIP7010_RS16690 (ABCIP7010_3374) | - | 3580618..3581505 (-) | 888 | WP_031965530.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16591.91 Da Isoelectric Point: 5.0937
>NTDB_id=1114770 ABCIP7010_RS16670 WP_000993726.1 3577410..3577895(-) (pilA) [Acinetobacter baumannii isolate CIP70.10]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=1114770 ABCIP7010_RS16670 WP_000993726.1 3577410..3577895(-) (pilA) [Acinetobacter baumannii isolate CIP70.10]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
45.86 |
97.516 |
0.447 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.558 |
95.652 |
0.398 |
| pilE | Neisseria gonorrhoeae MS11 |
37.736 |
98.758 |
0.373 |
| comP | Acinetobacter baylyi ADP1 |
36.709 |
98.137 |
0.36 |