Detailed information NTG1107056

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACLKM2_RS11875
• Genome accession: NZ_CP183899
• Coordinates: 2496771..2498936 (-)
• Length: 721 a.a.
• NCBI ID: WP_286412291.1
• Uniprot ID: -
• Organism: Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2491771..2503936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM2_RS11860	-	2494205..2495077 (-)	873	WP_180041094.1	hypothetical protein	-
ACLKM2_RS11865	aroB	2495090..2496169 (-)	1080	WP_244782714.1	3-dehydroquinate synthase	-
ACLKM2_RS11870	aroK	2496198..2496734 (-)	537	WP_100355174.1	shikimate kinase AroK	-
ACLKM2_RS11875	pilQ	2496771..2498936 (-)	2166	WP_286412291.1	type IV pilus secretin PilQ family protein	Machinery gene
ACLKM2_RS11880	pilP	2498953..2499480 (-)	528	WP_005094322.1	pilus assembly protein PilP	Machinery gene
ACLKM2_RS11885	comO	2499480..2500193 (-)	714	WP_005094323.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM2_RS11890	comN	2500190..2500828 (-)	639	WP_005094324.1	PilN domain-containing protein	Machinery gene
ACLKM2_RS11895	pilM	2500828..2501886 (-)	1059	WP_005168888.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 78281.49 Da
• Isoelectric Point: 4.9957

>NTDB_id=1107056 ACLKM2_RS11875 WP_286412291.1 2496771..2498936(-) (pilQ) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
MNKSIKEFIFGDANTMNRVFRQFSMGAVAIAVMQAASAQVAVTNIVAMQLPGQGTEIRVMFNGLPPQPQAYQLESPSRLI
LDFDQAQQNLKQSNIPVATREASSVDVTSDAQRARLTVNLADAGAFTTRVEGNTFILKINSATPVATAQPVLQQSAQGIS
NISFQRGAQGEGQVVIDLAGNNTPVDVQQQGTKIIVRTLGTKIPTHLTRRLNVNDFATPVSSVDAVNQNGSGMITIQSGE
SYEYMAYQTDNKLTISLKRPEAKSPLRPKTVAYSGKKISLDFQDIEVRRVLQLLADFTDINMVAADSVQGNITLRLKEVP
WDQALDIVLKTKNLDKRRNGNVIWIAPVTELIKAEEEEAKALKQSVALAPIQTEYMQLSYAKATDIEKLITQNKGASSSG
GSSNTTNNDDKESLLSSRGSVSIDARTNTIIVNDTQPFIDKIRNMVDLLDVQVKQVMVEARIVRATTDFTKEMGVKWGIL
SQGITNNNSLLVGGSDTTLWDLRDPQESDLGGYTYEIQRPQNLNVDLGVTSPGASRIAFGLISLSDFMLDLELSALQADG
YGEVISTPKVLTADKQKATVASGSQIPYQSAEGGGANAVSTTEFIDATLSLDVTPSITPDGKVQMELNITSDSPGNPTPT
GQLTINKNQINTNVLVDNGETVVLGGIFEQETRNAQTKVPFLGDIPYVGRLFRKDLKSDNKRELLIFVTPRIVNDSVSRN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=1107056 ACLKM2_RS11875 WP_286412291.1 2496771..2498936(-) (pilQ) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
ATGAATAAGAGTATTAAAGAATTTATTTTTGGGGATGCTAATACAATGAATCGTGTGTTTCGTCAGTTTTCAATGGGTGC
TGTTGCGATTGCGGTGATGCAAGCAGCTAGCGCGCAGGTAGCCGTGACCAATATCGTAGCTATGCAGCTTCCTGGACAAG
GAACTGAAATTCGGGTGATGTTCAATGGTTTGCCACCACAGCCACAGGCCTATCAATTAGAATCACCTTCACGTCTAATT
TTAGATTTTGACCAGGCCCAACAAAACTTAAAGCAAAGCAATATTCCGGTGGCAACACGTGAAGCCAGTTCGGTCGATGT
GACTTCGGATGCACAACGTGCCCGTTTGACTGTTAATCTGGCAGATGCTGGTGCCTTTACCACGCGAGTTGAAGGGAATA
CCTTTATCCTGAAAATCAATTCAGCGACGCCAGTCGCGACAGCTCAACCGGTATTACAGCAGTCAGCTCAGGGAATTAGC
AATATCAGTTTCCAGCGTGGGGCTCAAGGTGAAGGTCAGGTGGTGATTGACCTGGCAGGCAACAACACCCCGGTCGATGT
ACAGCAGCAGGGGACTAAAATCATTGTTCGAACCTTAGGCACGAAGATCCCGACGCATTTGACCCGTCGTCTGAATGTGA
ATGATTTTGCGACGCCTGTGTCGAGTGTGGATGCAGTGAATCAAAATGGATCAGGCATGATTACGATCCAGTCCGGGGAA
AGTTATGAATATATGGCTTATCAAACGGATAATAAGCTGACCATTAGTTTGAAACGTCCGGAAGCCAAGAGTCCGCTACG
TCCGAAGACCGTGGCTTATAGCGGCAAGAAAATTTCACTCGATTTCCAGGATATTGAAGTACGTCGTGTACTACAGCTTT
TGGCTGATTTTACCGATATCAATATGGTGGCAGCAGATAGTGTACAAGGCAATATTACCTTGCGCCTAAAAGAAGTGCCT
TGGGATCAGGCACTGGATATTGTACTGAAAACCAAAAACCTGGATAAACGCCGTAATGGTAATGTGATCTGGATTGCACC
AGTGACAGAATTGATTAAGGCAGAAGAGGAAGAGGCAAAAGCCTTGAAGCAGAGCGTTGCACTTGCCCCTATTCAGACTG
AATATATGCAGCTGAGTTATGCTAAAGCTACAGATATTGAAAAACTGATCACTCAAAATAAAGGTGCATCTAGTTCGGGT
GGTTCAAGTAACACCACGAATAATGATGATAAAGAAAGTTTATTAAGTTCACGTGGTTCAGTGTCTATTGATGCACGAAC
CAATACCATTATTGTGAATGATACCCAGCCTTTTATCGATAAAATCCGGAATATGGTGGATCTGCTCGATGTACAGGTCA
AGCAGGTGATGGTTGAGGCGCGTATTGTACGTGCCACCACTGACTTCACCAAAGAAATGGGGGTGAAGTGGGGGATTCTG
TCACAAGGCATTACCAACAATAATAGCCTTCTGGTCGGTGGTAGCGATACGACATTGTGGGATCTTAGAGATCCGCAAGA
AAGTGATTTGGGCGGATATACTTATGAAATTCAGCGTCCACAAAACCTGAATGTAGACTTGGGTGTCACCAGTCCGGGCG
CCAGCCGTATTGCCTTTGGTCTGATTAGTCTCTCTGATTTTATGCTGGATCTTGAACTGTCTGCATTGCAAGCGGATGGC
TATGGTGAAGTTATTTCAACACCAAAAGTACTCACAGCAGACAAGCAAAAAGCCACGGTTGCATCTGGTTCACAAATTCC
GTATCAATCTGCTGAAGGTGGAGGGGCCAATGCTGTATCCACTACTGAGTTTATTGATGCGACTTTGAGTCTGGATGTCA
CGCCAAGTATTACTCCAGATGGGAAAGTGCAGATGGAGCTGAATATTACCAGTGACTCCCCAGGCAACCCAACGCCGACC
GGACAATTGACTATTAATAAAAACCAGATCAATACCAATGTGCTGGTGGATAATGGTGAAACAGTGGTCCTGGGTGGGAT
TTTTGAGCAGGAAACCCGTAATGCACAAACCAAGGTGCCATTCCTGGGGGATATTCCTTATGTAGGGCGTTTATTCCGTA
AAGATTTAAAATCGGATAACAAGCGTGAGTTGCTGATTTTCGTTACACCTCGAATTGTTAATGACAGTGTTTCAAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• AMIN domain (AMIN) (55-135)

• Secretin and TonB N terminus short domain (STN) (305-347)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

• Bacterial type II/III secretion system short domain (Secretin_N) (375-455)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	73.481	100	0.738
pilQ	Acinetobacter baumannii strain A118	73.343	100	0.736
comQ	Acinetobacter baylyi ADP1	69.693	99.307	0.692
pilQ	Pseudomonas aeruginosa PAK	40.997	100	0.411
pilQ	Legionella pneumophila strain Lp02	36.723	98.197	0.361