Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | ACLKM2_RS11890 | Genome accession | NZ_CP183899 |
| Coordinates | 2500190..2500828 (-) | Length | 212 a.a. |
| NCBI ID | WP_005094324.1 | Uniprot ID | N9MCI1 |
| Organism | Acinetobacter pseudolwoffii strain M8_NDM_tet(X3) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2495190..2505828
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKM2_RS11870 | aroK | 2496198..2496734 (-) | 537 | WP_100355174.1 | shikimate kinase AroK | - |
| ACLKM2_RS11875 | pilQ | 2496771..2498936 (-) | 2166 | WP_286412291.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ACLKM2_RS11880 | pilP | 2498953..2499480 (-) | 528 | WP_005094322.1 | pilus assembly protein PilP | Machinery gene |
| ACLKM2_RS11885 | comO | 2499480..2500193 (-) | 714 | WP_005094323.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACLKM2_RS11890 | comN | 2500190..2500828 (-) | 639 | WP_005094324.1 | PilN domain-containing protein | Machinery gene |
| ACLKM2_RS11895 | pilM | 2500828..2501886 (-) | 1059 | WP_005168888.1 | pilus assembly protein PilM | Machinery gene |
| ACLKM2_RS11900 | ponA | 2502052..2504580 (+) | 2529 | WP_411686328.1 | penicillin-binding protein PBP1a | - |
| ACLKM2_RS11905 | - | 2504644..2505447 (-) | 804 | WP_286411321.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23869.01 Da Isoelectric Point: 4.8090
>NTDB_id=1107059 ACLKM2_RS11890 WP_005094324.1 2500190..2500828(-) (comN) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
MAKINLLPWRDELRIKRNNEFVAICVGALFLGLAAAGSTWFYYDHKLQDQEQANQLIQSTNQNLDVQLKALEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPANMYITKFQRTGDKFSIEGRAESPNTVAELLRNLEASSWYRNAFMNAFLV
AEESKEKAPSSIIPRVEESYGSFTVTVDLDQIAEPVLNEEQQAANTTPGASS
MAKINLLPWRDELRIKRNNEFVAICVGALFLGLAAAGSTWFYYDHKLQDQEQANQLIQSTNQNLDVQLKALEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPANMYITKFQRTGDKFSIEGRAESPNTVAELLRNLEASSWYRNAFMNAFLV
AEESKEKAPSSIIPRVEESYGSFTVTVDLDQIAEPVLNEEQQAANTTPGASS
Nucleotide
Download Length: 639 bp
>NTDB_id=1107059 ACLKM2_RS11890 WP_005094324.1 2500190..2500828(-) (comN) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
ATGGCAAAGATTAACTTACTTCCTTGGCGTGATGAGCTAAGAATTAAAAGAAATAATGAATTCGTGGCAATCTGTGTGGG
GGCGCTTTTCTTAGGACTGGCGGCGGCAGGTTCAACCTGGTTTTATTATGATCACAAGCTTCAGGATCAGGAACAGGCCA
ATCAGCTGATTCAAAGTACCAACCAGAATCTGGATGTGCAGTTAAAAGCGCTAGAAGGTTTGCAAGAGCAACGTAATGCC
ATTGTTGAGCGGATGAAGCTGATTCAGGGCTTGCAAACGCAACGTCCGATCGCGGTGCATTTGATTGATGAAATTGTGCG
GGTGACACCAGCCAATATGTACATCACCAAGTTTCAGCGTACTGGCGATAAATTTAGCATCGAAGGTCGAGCCGAGAGTC
CAAATACCGTAGCAGAATTACTGCGTAATCTGGAAGCTTCCTCCTGGTACCGAAATGCCTTTATGAATGCCTTCCTGGTG
GCTGAAGAATCCAAAGAAAAGGCACCGAGCTCGATTATTCCACGTGTTGAAGAGTCTTATGGCAGCTTTACCGTGACTGT
GGATCTGGATCAGATCGCTGAACCGGTACTGAATGAAGAACAGCAAGCAGCCAATACCACTCCGGGGGCATCATCATGA
ATGGCAAAGATTAACTTACTTCCTTGGCGTGATGAGCTAAGAATTAAAAGAAATAATGAATTCGTGGCAATCTGTGTGGG
GGCGCTTTTCTTAGGACTGGCGGCGGCAGGTTCAACCTGGTTTTATTATGATCACAAGCTTCAGGATCAGGAACAGGCCA
ATCAGCTGATTCAAAGTACCAACCAGAATCTGGATGTGCAGTTAAAAGCGCTAGAAGGTTTGCAAGAGCAACGTAATGCC
ATTGTTGAGCGGATGAAGCTGATTCAGGGCTTGCAAACGCAACGTCCGATCGCGGTGCATTTGATTGATGAAATTGTGCG
GGTGACACCAGCCAATATGTACATCACCAAGTTTCAGCGTACTGGCGATAAATTTAGCATCGAAGGTCGAGCCGAGAGTC
CAAATACCGTAGCAGAATTACTGCGTAATCTGGAAGCTTCCTCCTGGTACCGAAATGCCTTTATGAATGCCTTCCTGGTG
GCTGAAGAATCCAAAGAAAAGGCACCGAGCTCGATTATTCCACGTGTTGAAGAGTCTTATGGCAGCTTTACCGTGACTGT
GGATCTGGATCAGATCGCTGAACCGGTACTGAATGAAGAACAGCAAGCAGCCAATACCACTCCGGGGGCATCATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
66.986 |
98.585 |
0.66 |
| pilN | Acinetobacter baumannii D1279779 |
70.466 |
91.038 |
0.642 |