Detailed information NTG1106998

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACLKM3_RS01180
• Genome accession: NZ_CP183897
• Coordinates: 258899..261031 (+)
• Length: 710 a.a.
• NCBI ID: WP_171066631.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain M10_NDM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 253899..266031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM3_RS01160	pilM	255917..256975 (+)	1059	WP_019836139.1	pilus assembly protein PilM	Machinery gene
ACLKM3_RS01165	pilN	256975..257610 (+)	636	WP_019836140.1	PilN domain-containing protein	Machinery gene
ACLKM3_RS01170	pilO	257607..258314 (+)	708	WP_019836141.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM3_RS01175	pilP	258314..258838 (+)	525	WP_411690781.1	pilus assembly protein PilP	Machinery gene
ACLKM3_RS01180	pilQ	258899..261031 (+)	2133	WP_171066631.1	type IV pilus secretin PilQ	Machinery gene
ACLKM3_RS01185	aroK	261068..261610 (+)	543	WP_026437991.1	shikimate kinase AroK	-
ACLKM3_RS01190	aroB	261630..262709 (+)	1080	WP_019836145.1	3-dehydroquinate synthase	-
ACLKM3_RS01195	-	262719..263564 (+)	846	WP_019836146.1	hypothetical protein	-

Sequence

Protein

• Length: 710 a.a.
• Molecular weight: 76745.83 Da
• Isoelectric Point: 5.4879

>NTDB_id=1106998 ACLKM3_RS01180 WP_171066631.1 258899..261031(+) (pilQ) [Acinetobacter towneri strain M10_NDM]
MNNLFRQFSMGAVAMAVMQVANAQVSITNIVPMQIPGQGTEIRVMFNGLPPQPAAYQLEQPSRLILDFDKAQQTLKQNSV
AVATKEASSVEVSSDAQRSRLTVNLADAGAFTTRVEGNTFILKINSKTATPVAAVTAQRSAQGVSNIGFQRGGEGEGQVV
IDLLGSNTPVDVQQQGSKIVVRTLGNKIPAHLARRLNVNDFATPVSTIDAHNDGSNGVITIQSAGSYEYMAYQAEDKLTI
SLKRPVDKNPFKPRAAQSYTGKKISLDFQDIEVRRVLQLLADFTGINMVASDTVQGNITLRLKDVPWDQALDIILKSKNL
DKRRNGNVIWIAPVSELIKAEEEEAKAIAQSVKLAPLQTEYIQLNYAKAADIEKLITDGKNASNSRSGSNTNDPLGDSVG
SLLSPRGTVSVDPRTNTLIINDTSAKIDQIRQMIDLLDVSVKQVMIEARIVRATTDFTKEMGVKWGILSQGITNNNHLLV
GGSDTTLWNLREPEKDDDTGGWKYEIERPQNLNVDLGVTSAGASRIAFGLISLSDFMLDLELSALQADGYGEVISTPKIL
TADKQNAKVASGTQIPYQSSEGGGVNAVSTTEFIDATLSLNVTPSITPDGKVQMQLNITSDSPGAATPTGQLTINKNAVN
TNVLVDNGETVVLGGIFEQQTANSQTKVPFLGDIPYIGRLFRKDVKSENKRELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2133 bp

>NTDB_id=1106998 ACLKM3_RS01180 WP_171066631.1 258899..261031(+) (pilQ) [Acinetobacter towneri strain M10_NDM]
ATGAACAATTTGTTCCGTCAGTTTTCAATGGGTGCAGTCGCAATGGCCGTGATGCAAGTTGCCAATGCCCAAGTCAGCAT
TACCAACATCGTACCCATGCAAATTCCGGGGCAGGGCACCGAAATTCGTGTGATGTTTAATGGTTTGCCACCTCAACCTG
CTGCATATCAGCTCGAACAACCTTCCCGTTTGATTCTAGATTTTGATAAAGCACAACAAACTCTGAAACAAAACAGCGTT
GCTGTTGCGACCAAAGAAGCTAGCTCTGTAGAGGTCAGTTCAGATGCACAGCGTTCACGTTTAACTGTGAACTTAGCAGA
CGCGGGGGCATTCACCACGCGGGTTGAAGGCAACACCTTTATTTTAAAAATCAACTCAAAAACGGCAACCCCTGTGGCTG
CCGTAACTGCTCAACGTAGCGCACAAGGCGTTTCCAATATTGGTTTCCAGCGCGGCGGTGAAGGTGAAGGTCAGGTGGTG
ATTGATCTACTCGGTAGCAATACGCCTGTAGATGTGCAGCAGCAAGGTAGCAAAATTGTGGTACGTACTTTAGGTAATAA
AATACCTGCACATTTGGCGCGTCGTTTAAATGTCAATGATTTTGCAACACCTGTTTCGACCATTGATGCACACAATGATG
GCAGCAATGGCGTGATTACTATTCAGTCTGCAGGCAGCTATGAATATATGGCGTATCAAGCAGAAGACAAACTAACGATC
AGCCTAAAACGCCCGGTTGATAAAAACCCGTTTAAACCGCGTGCAGCGCAAAGCTATACAGGCAAAAAGATTTCATTGGA
TTTCCAAGACATCGAAGTGCGTCGTGTATTGCAGTTATTGGCTGATTTCACAGGCATTAACATGGTGGCATCAGACACCG
TGCAAGGCAACATTACCTTACGTTTAAAAGATGTGCCTTGGGATCAAGCCTTAGATATTATCTTGAAAAGCAAAAACTTG
GATAAGCGTCGTAATGGTAACGTCATCTGGATTGCGCCTGTTTCTGAATTGATTAAAGCCGAAGAAGAGGAAGCTAAGGC
GATTGCGCAAAGTGTCAAGTTGGCGCCATTACAAACTGAATATATTCAATTGAACTATGCTAAAGCTGCAGATATTGAGA
AGCTGATTACCGACGGTAAAAACGCTTCTAACTCACGCAGTGGTTCTAATACGAATGACCCATTAGGTGATAGCGTGGGC
AGTTTGCTGAGCCCACGTGGTACAGTGTCGGTAGATCCACGTACCAATACCTTAATCATTAACGATACATCGGCAAAAAT
TGATCAGATTCGTCAAATGATTGATTTGCTCGATGTGTCTGTGAAGCAGGTCATGATTGAAGCACGTATTGTTCGTGCAA
CCACAGATTTCACCAAAGAAATGGGGGTGAAGTGGGGCATCTTGTCACAAGGGATTACCAACAATAATCACTTGTTAGTC
GGTGGTAGTGATACGACCTTGTGGAACTTGCGTGAACCAGAAAAAGATGATGATACGGGTGGTTGGAAGTATGAAATTGA
ACGTCCGCAAAACCTGAATGTCGATTTAGGAGTGACCAGTGCAGGTGCTAGCCGGATTGCCTTTGGTTTAATCAGTTTGT
CTGACTTTATGCTAGATTTGGAATTGTCTGCATTACAAGCCGATGGTTACGGTGAAGTGATTTCGACACCAAAAATCCTG
ACTGCAGATAAGCAAAATGCCAAAGTCGCATCGGGTACTCAAATTCCGTATCAATCTTCTGAGGGTGGGGGTGTCAATGC
TGTATCGACCACCGAATTTATTGATGCAACTTTAAGTCTGAATGTGACTCCAAGTATCACACCTGATGGTAAAGTTCAAA
TGCAATTAAATATCACCAGTGATTCACCAGGTGCAGCAACACCTACAGGTCAGCTCACCATTAACAAGAACGCCGTGAAT
ACCAACGTTTTGGTGGACAATGGTGAAACTGTAGTCTTGGGGGGTATTTTTGAGCAACAAACGGCTAACTCTCAAACCAA
GGTTCCATTCTTGGGCGATATTCCTTATATCGGACGTTTATTCCGTAAAGATGTTAAGTCGGAAAACAAACGTGAGTTGC
TGATTTTTGTTACACCACGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (290-333)

• AMIN domain (AMIN) (40-120)

• Bacterial type II and III secretion system protein (Secretin) (544-702)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	76.519	100	0.78
pilQ	Acinetobacter baumannii strain A118	76.381	100	0.779
comQ	Acinetobacter baylyi ADP1	73.986	100	0.745
pilQ	Pseudomonas aeruginosa PAK	40.541	99.014	0.401
pilQ	Legionella pneumophila strain ERS1305867	38.352	99.155	0.38
pilQ	Legionella pneumophila strain Lp02	38.352	99.155	0.38