Detailed information NTG1099402

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACM660_RS18020
• Genome accession: NZ_CP181170
• Coordinates: 3809680..3810738 (-)
• Length: 352 a.a.
• NCBI ID: WP_004803903.1
• Uniprot ID: N9SPD6
• Organism: Acinetobacter sp. SEK541
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3804680..3815738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM660_RS17995 (ACM660_17995)	aroK	3804986..3805546 (-)	561	WP_005201348.1	shikimate kinase AroK	-
ACM660_RS18000 (ACM660_18000)	pilQ	3805566..3807743 (-)	2178	WP_005201350.1	type IV pilus secretin PilQ family protein	Machinery gene
ACM660_RS18005 (ACM660_18005)	pilP	3807760..3808287 (-)	528	WP_005201352.1	pilus assembly protein PilP	Machinery gene
ACM660_RS18010 (ACM660_18010)	comO	3808290..3809033 (-)	744	WP_005201354.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACM660_RS18015 (ACM660_18015)	pilN	3809030..3809680 (-)	651	WP_005201357.1	PilN domain-containing protein	Machinery gene
ACM660_RS18020 (ACM660_18020)	comM	3809680..3810738 (-)	1059	WP_004803903.1	pilus assembly protein PilM	Machinery gene
ACM660_RS18025 (ACM660_18025)	ponA	3810901..3813495 (+)	2595	WP_005201359.1	penicillin-binding protein PBP1a	-
ACM660_RS18030 (ACM660_18030)	-	3813511..3814329 (-)	819	WP_005201360.1	putative RNA methyltransferase	-
ACM660_RS18035 (ACM660_18035)	mraY	3814389..3815507 (-)	1119	WP_004803897.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39079.81 Da
• Isoelectric Point: 4.5488

>NTDB_id=1099402 ACM660_RS18020 WP_004803903.1 3809680..3810738(-) (comM) [Acinetobacter sp. SEK541]
MLRLYRKPNKGLTGVDISSTTVKLLELSVKNGRYWVESYAVMPLPESSVVEKSILNPEAVGDALERVVNLANPHTMNVAI
AVPTSMVINKIIEMDADMTDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1099402 ACM660_RS18020 WP_004803903.1 3809680..3810738(-) (comM) [Acinetobacter sp. SEK541]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAACGGGTGTCGATATTAGTTCGACAACTGTTAAATTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCAGTGATGCCATTGCCTGAAAGCAGCGTGGTTGAAAAAAGCA
TACTGAATCCAGAGGCGGTAGGGGATGCGCTTGAGAGAGTGGTCAACCTTGCAAATCCTCACACCATGAATGTTGCGATT
GCAGTACCGACATCGATGGTCATTAATAAGATCATCGAGATGGATGCTGACATGACGGATGAAGAACGAGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTGAGCCTAGATTTTGAAGTTTTACCTGATCGTTTGG
CCAATCCAAACCGGGTAAATGTGCTCTTGGTTGCAACGCGCACCGAGAATGTAGACACGCGCGTAGAAGTGCTTGAACTG
GCGGGTTTAACTGCAAAAATTGCAGAAGTTGAAAGCTATGCTATGGAACGTGCGTTCAGTGTGTTTGCAGATACGCTACC
AATGGGCGCAAATACGGTGGGCATTTTGGATATTGGTCATACCATGACGACCTTATCTGTCATGCAAAAAGGCAAGATCA
TCTATACACGTGAGCAAGTGTTTGGTGGCCGCCAATTGACCCAAGATGTGCAAAGTCGCTATGGCCTTTCTTTTGAAGAA
GCTGGTCGTGCTAAAAAAGAAAGAACCTTGCCCGATGACTATGACACAGAAGTCCTAGAACCTTTCTTGGACGCCGTCGT
ACAACAAGCCGCACGTTCACTCCAATTCTTCTTTTCATCTTCTCAATTCAATGAAATTGATCATATTTTACTGGCTGGTG
GGAATGCCAATATTCCAGGCCTAGCTAAGCTATTACAACAAAAACTCGGTTATCGTGTCACCATTGCCAATCCATTCCTA
CAAATGGGTTTTTCTCCCCAAATTGATATTAAAAAAATTGAAAACGATGCTTCCTCTTTGATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9SPD6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.5	100	0.875
comM	Acinetobacter baylyi ADP1	82.386	100	0.824
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423