Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AL_RS10620 | Genome accession | NZ_CP181107 |
| Coordinates | 2121233..2121703 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain AG21-0612 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2091534..2147481 | 2121233..2121703 | within | 0 |
Gene organization within MGE regions
Location: 2091534..2147481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AL_RS10400 (ACM6AL_10400) | scn | 2091534..2091884 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AL_RS10405 (ACM6AL_10405) | - | 2092569..2093018 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AL_RS10410 (ACM6AL_10410) | - | 2093113..2093451 (-) | 339 | Protein_2013 | SH3 domain-containing protein | - |
| ACM6AL_RS10415 (ACM6AL_10415) | sak | 2094098..2094589 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AL_RS10420 (ACM6AL_10420) | - | 2094780..2095535 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AL_RS10425 (ACM6AL_10425) | - | 2095547..2095801 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AL_RS10430 (ACM6AL_10430) | - | 2095853..2095960 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AL_RS10435 (ACM6AL_10435) | pepG1 | 2096013..2096147 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AL_RS10440 (ACM6AL_10440) | - | 2096339..2096635 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AL_RS10445 (ACM6AL_10445) | - | 2096693..2096980 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AL_RS10450 (ACM6AL_10450) | - | 2097027..2097179 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AL_RS10455 (ACM6AL_10455) | - | 2097169..2100954 (-) | 3786 | WP_000582165.1 | phage tail spike protein | - |
| ACM6AL_RS10460 (ACM6AL_10460) | - | 2100970..2102454 (-) | 1485 | WP_000567394.1 | phage distal tail protein | - |
| ACM6AL_RS10465 (ACM6AL_10465) | - | 2102451..2106980 (-) | 4530 | WP_416152582.1 | phage tail tape measure protein | - |
| ACM6AL_RS10470 (ACM6AL_10470) | gpGT | 2107037..2107174 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AL_RS10475 (ACM6AL_10475) | gpG | 2107225..2107575 (-) | 351 | WP_001096354.1 | phage tail assembly chaperone G | - |
| ACM6AL_RS10480 (ACM6AL_10480) | - | 2107625..2107864 (-) | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| ACM6AL_RS10485 (ACM6AL_10485) | - | 2107891..2108535 (-) | 645 | WP_000260578.1 | major tail protein | - |
| ACM6AL_RS10490 (ACM6AL_10490) | - | 2108539..2108943 (-) | 405 | WP_000565500.1 | hypothetical protein | - |
| ACM6AL_RS10495 (ACM6AL_10495) | - | 2108940..2109344 (-) | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| ACM6AL_RS10500 (ACM6AL_10500) | - | 2109341..2109703 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AL_RS10505 (ACM6AL_10505) | - | 2109687..2109971 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AL_RS10510 (ACM6AL_10510) | - | 2109961..2110245 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| ACM6AL_RS10515 (ACM6AL_10515) | - | 2110265..2111410 (-) | 1146 | WP_310700555.1 | phage major capsid protein | - |
| ACM6AL_RS10520 (ACM6AL_10520) | - | 2111434..2112171 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| ACM6AL_RS10525 (ACM6AL_10525) | - | 2112155..2113342 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ACM6AL_RS10530 (ACM6AL_10530) | - | 2113358..2115019 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ACM6AL_RS10535 (ACM6AL_10535) | - | 2115016..2115360 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AL_RS10540 (ACM6AL_10540) | - | 2115489..2115788 (-) | 300 | WP_000988336.1 | HNH endonuclease | - |
| ACM6AL_RS10545 (ACM6AL_10545) | - | 2116020..2116436 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AL_RS10550 (ACM6AL_10550) | - | 2116464..2116664 (-) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| ACM6AL_RS10555 (ACM6AL_10555) | rinB | 2116664..2116813 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AL_RS10560 (ACM6AL_10560) | - | 2116810..2117196 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| ACM6AL_RS10565 (ACM6AL_10565) | - | 2117193..2117399 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| ACM6AL_RS10570 (ACM6AL_10570) | - | 2117396..2117641 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACM6AL_RS10575 (ACM6AL_10575) | - | 2117678..2118211 (-) | 534 | WP_000181819.1 | dUTP diphosphatase | - |
| ACM6AL_RS10580 (ACM6AL_10580) | - | 2118204..2118446 (-) | 243 | WP_000700108.1 | hypothetical protein | - |
| ACM6AL_RS10585 (ACM6AL_10585) | - | 2118436..2118672 (-) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| ACM6AL_RS10590 (ACM6AL_10590) | - | 2118665..2119036 (-) | 372 | WP_001549172.1 | hypothetical protein | - |
| ACM6AL_RS10595 (ACM6AL_10595) | - | 2119045..2119287 (-) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| ACM6AL_RS10600 (ACM6AL_10600) | - | 2119291..2119659 (-) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AL_RS10605 (ACM6AL_10605) | - | 2119672..2120076 (-) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AL_RS10610 (ACM6AL_10610) | - | 2120085..2120303 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACM6AL_RS10615 (ACM6AL_10615) | - | 2120310..2121203 (-) | 894 | Protein_2054 | DnaD domain protein | - |
| ACM6AL_RS10620 (ACM6AL_10620) | ssbA | 2121233..2121703 (-) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AL_RS10625 (ACM6AL_10625) | - | 2121704..2122321 (-) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| ACM6AL_RS10630 (ACM6AL_10630) | - | 2122402..2123322 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACM6AL_RS10635 (ACM6AL_10635) | - | 2123324..2125267 (-) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| ACM6AL_RS10640 (ACM6AL_10640) | - | 2125276..2125539 (-) | 264 | WP_001556054.1 | hypothetical protein | - |
| ACM6AL_RS10645 (ACM6AL_10645) | - | 2125548..2125808 (-) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| ACM6AL_RS10650 (ACM6AL_10650) | - | 2125848..2126108 (-) | 261 | WP_001549178.1 | DUF2482 family protein | - |
| ACM6AL_RS10655 (ACM6AL_10655) | - | 2126203..2126364 (-) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| ACM6AL_RS10660 (ACM6AL_10660) | - | 2126361..2126681 (-) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| ACM6AL_RS10665 (ACM6AL_10665) | - | 2126740..2126970 (+) | 231 | WP_000549548.1 | hypothetical protein | - |
| ACM6AL_RS10670 (ACM6AL_10670) | - | 2126967..2127143 (-) | 177 | WP_001001356.1 | hypothetical protein | - |
| ACM6AL_RS10675 (ACM6AL_10675) | - | 2127159..2127911 (-) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AL_RS10680 (ACM6AL_10680) | - | 2127962..2128291 (+) | 330 | WP_000180411.1 | hypothetical protein | - |
| ACM6AL_RS10685 (ACM6AL_10685) | - | 2128280..2128495 (-) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| ACM6AL_RS10690 (ACM6AL_10690) | - | 2128511..2128774 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| ACM6AL_RS10695 (ACM6AL_10695) | - | 2128771..2128944 (-) | 174 | WP_001801500.1 | hypothetical protein | - |
| ACM6AL_RS10700 (ACM6AL_10700) | - | 2128907..2129620 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ACM6AL_RS10705 (ACM6AL_10705) | - | 2129636..2130568 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ACM6AL_RS10710 (ACM6AL_10710) | - | 2130574..2130915 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ACM6AL_RS10715 (ACM6AL_10715) | - | 2131119..2131301 (+) | 183 | WP_000705246.1 | hypothetical protein | - |
| ACM6AL_RS10720 (ACM6AL_10720) | - | 2131379..2132092 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACM6AL_RS10725 (ACM6AL_10725) | - | 2132283..2133320 (+) | 1038 | WP_000857199.1 | tyrosine-type recombinase/integrase | - |
| ACM6AL_RS10730 (ACM6AL_10730) | sph | 2133377..2134201 (+) | 825 | Protein_2077 | sphingomyelin phosphodiesterase | - |
| ACM6AL_RS10735 (ACM6AL_10735) | lukG | 2134439..2135455 (-) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AL_RS10740 (ACM6AL_10740) | lukH | 2135477..2136532 (-) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AL_RS10745 (ACM6AL_10745) | - | 2136967..2138190 (+) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| ACM6AL_RS10750 (ACM6AL_10750) | - | 2138562..2139407 (-) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| ACM6AL_RS10755 (ACM6AL_10755) | - | 2139469..2140380 (-) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| ACM6AL_RS10760 (ACM6AL_10760) | - | 2140541..2141848 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AL_RS10765 (ACM6AL_10765) | - | 2142701..2143144 (-) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| ACM6AL_RS10770 (ACM6AL_10770) | - | 2143250..2143686 (-) | 437 | Protein_2085 | hypothetical protein | - |
| ACM6AL_RS10775 (ACM6AL_10775) | - | 2144004..2144594 (-) | 591 | WP_001293058.1 | terminase small subunit | - |
| ACM6AL_RS10780 (ACM6AL_10780) | - | 2144591..2144803 (-) | 213 | WP_000128898.1 | LuxR C-terminal-related transcriptional regulator | - |
| ACM6AL_RS10785 (ACM6AL_10785) | - | 2144864..2145410 (+) | 547 | Protein_2088 | site-specific integrase | - |
| ACM6AL_RS10790 (ACM6AL_10790) | groL | 2145505..2147121 (-) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| ACM6AL_RS10795 (ACM6AL_10795) | groES | 2147197..2147481 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=1098367 ACM6AL_RS10620 WP_000934753.1 2121233..2121703(-) (ssbA) [Staphylococcus aureus strain AG21-0612]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098367 ACM6AL_RS10620 WP_000934753.1 2121233..2121703(-) (ssbA) [Staphylococcus aureus strain AG21-0612]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |