Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ABXH21_RS08015 | Genome accession | NZ_AP031472 |
| Coordinates | 1787346..1788395 (+) | Length | 349 a.a. |
| NCBI ID | WP_007117194.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain NBRC 115781 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1782346..1793395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXH21_RS07995 (SKB0120_15600) | - | 1782597..1783685 (+) | 1089 | WP_353551059.1 | tRNA pseudouridine(13) synthase TruD | - |
| ABXH21_RS08000 (SKB0120_15610) | - | 1783722..1785071 (-) | 1350 | WP_353551060.1 | diguanylate cyclase | - |
| ABXH21_RS08005 (SKB0120_15620) | - | 1785417..1785941 (-) | 525 | WP_096489252.1 | C40 family peptidase | - |
| ABXH21_RS08010 (SKB0120_15630) | - | 1786367..1787092 (-) | 726 | WP_353551061.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ABXH21_RS08015 (SKB0120_15640) | pilT | 1787346..1788395 (+) | 1050 | WP_007117194.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ABXH21_RS08020 (SKB0120_15650) | pilU | 1788445..1789596 (+) | 1152 | WP_007117195.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ABXH21_RS08025 (SKB0120_15660) | - | 1789667..1790191 (-) | 525 | WP_353551062.1 | N-acetyltransferase family protein | - |
| ABXH21_RS08030 (SKB0120_15670) | ribF | 1790317..1791330 (+) | 1014 | WP_353551063.1 | riboflavin biosynthesis protein RibF | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38916.62 Da Isoelectric Point: 6.7822
>NTDB_id=109703 ABXH21_RS08015 WP_007117194.1 1787346..1788395(+) (pilT) [Moraxella osloensis strain NBRC 115781]
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
Nucleotide
Download Length: 1050 bp
>NTDB_id=109703 ABXH21_RS08015 WP_007117194.1 1787346..1788395(+) (pilT) [Moraxella osloensis strain NBRC 115781]
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCCCTCGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAATTTTTTGAAACCGACTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGTGGCGCAGGTGCGGTATTTCGTACCATTCCGTCTGAAGT
CTTGACGATGGAGCAGCTTGGGATGGGACCGATTTTTGAGAAAATCTCTAATTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACAGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGTGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAATCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCCCTCGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAATTTTTTGAAACCGACTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGTGGCGCAGGTGCGGTATTTCGTACCATTCCGTCTGAAGT
CTTGACGATGGAGCAGCTTGGGATGGGACCGATTTTTGAGAAAATCTCTAATTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACAGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGTGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAATCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii D1279779 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii strain A118 |
80 |
98.854 |
0.791 |
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
98.567 |
0.765 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.326 |
98.567 |
0.762 |
| pilT | Acinetobacter baylyi ADP1 |
76.744 |
98.567 |
0.756 |
| pilT | Legionella pneumophila strain Lp02 |
74.26 |
96.848 |
0.719 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.26 |
96.848 |
0.719 |
| pilT | Neisseria meningitidis 8013 |
67.536 |
98.854 |
0.668 |
| pilT | Neisseria gonorrhoeae MS11 |
67.246 |
98.854 |
0.665 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.976 |
95.129 |
0.656 |
| pilT | Vibrio cholerae strain A1552 |
68.976 |
95.129 |
0.656 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.436 |
100 |
0.524 |
| pilU | Acinetobacter baylyi ADP1 |
41.329 |
99.14 |
0.41 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
97.135 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
40 |
95.989 |
0.384 |