Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACM0CZ_RS18030 | Genome accession | NZ_CP180559 |
| Coordinates | 3903912..3904232 (+) | Length | 106 a.a. |
| NCBI ID | WP_011707247.1 | Uniprot ID | A0AAX0XL99 |
| Organism | Aeromonas hydrophila strain BJ014 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3898912..3909232
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM0CZ_RS18005 | trhA | 3899548..3900183 (-) | 636 | WP_076362887.1 | PAQR family membrane homeostasis protein TrhA | - |
| ACM0CZ_RS18010 | - | 3900408..3901913 (+) | 1506 | WP_411637986.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ACM0CZ_RS18015 | - | 3902019..3902570 (+) | 552 | WP_168968697.1 | septation protein A | - |
| ACM0CZ_RS18020 | - | 3902596..3902892 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| ACM0CZ_RS18025 | cysQ | 3902973..3903743 (-) | 771 | WP_187267991.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACM0CZ_RS18030 | comEA | 3903912..3904232 (+) | 321 | WP_011707247.1 | ComEA family DNA-binding protein | Machinery gene |
| ACM0CZ_RS18035 | galU | 3904328..3905239 (+) | 912 | WP_060389820.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACM0CZ_RS18040 | - | 3905453..3906850 (+) | 1398 | WP_039215909.1 | peptide MFS transporter | - |
| ACM0CZ_RS18045 | - | 3906923..3907894 (-) | 972 | WP_017410997.1 | response regulator | - |
| ACM0CZ_RS18050 | - | 3908234..3908911 (+) | 678 | WP_168968700.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=1096626 ACM0CZ_RS18030 WP_011707247.1 3903912..3904232(+) (comEA) [Aeromonas hydrophila strain BJ014]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=1096626 ACM0CZ_RS18030 WP_011707247.1 3903912..3904232(+) (comEA) [Aeromonas hydrophila strain BJ014]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATAAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAGTATAAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAAAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.939 |
92.453 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |