Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | ACLSSQ_RS14695 | Genome accession | NZ_CP179682 |
| Coordinates | 3093340..3093735 (-) | Length | 131 a.a. |
| NCBI ID | WP_014236553.1 | Uniprot ID | A0A5H2YB23 |
| Organism | Azospira sp. APE16 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3088340..3098735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLSSQ_RS14675 (ACLSSQ_14675) | - | 3089001..3090170 (-) | 1170 | WP_416243110.1 | efflux RND transporter periplasmic adaptor subunit | - |
| ACLSSQ_RS14680 (ACLSSQ_14680) | - | 3090389..3091081 (+) | 693 | WP_416243111.1 | Crp/Fnr family transcriptional regulator | - |
| ACLSSQ_RS14685 (ACLSSQ_14685) | - | 3091222..3092745 (+) | 1524 | WP_416243112.1 | CHAD domain-containing protein | - |
| ACLSSQ_RS14690 (ACLSSQ_14690) | sixA | 3092774..3093238 (+) | 465 | WP_043797885.1 | phosphohistidine phosphatase SixA | - |
| ACLSSQ_RS14695 (ACLSSQ_14695) | pilA/pilAI | 3093340..3093735 (-) | 396 | WP_014236553.1 | pilin | Machinery gene |
| ACLSSQ_RS14700 (ACLSSQ_14700) | - | 3093906..3095495 (-) | 1590 | WP_152090581.1 | HD family phosphohydrolase | - |
| ACLSSQ_RS14705 (ACLSSQ_14705) | - | 3095506..3097872 (-) | 2367 | WP_416243113.1 | GspE/PulE family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13362.44 Da Isoelectric Point: 7.6311
>NTDB_id=1092564 ACLSSQ_RS14695 WP_014236553.1 3093340..3093735(-) (pilA/pilAI) [Azospira sp. APE16]
MNKVQQGFTLIELMVVVAIIGILAAVALPAYSDYQAKGKIAAGLAEISAVRTAYEMIANDGGTPTEATIGLDTSKSGHCT
YTVDNTGISCALKNAPTKVNGLAIKLARAAGGAWSCDASALPTDMKPKGCS
MNKVQQGFTLIELMVVVAIIGILAAVALPAYSDYQAKGKIAAGLAEISAVRTAYEMIANDGGTPTEATIGLDTSKSGHCT
YTVDNTGISCALKNAPTKVNGLAIKLARAAGGAWSCDASALPTDMKPKGCS
Nucleotide
Download Length: 396 bp
>NTDB_id=1092564 ACLSSQ_RS14695 WP_014236553.1 3093340..3093735(-) (pilA/pilAI) [Azospira sp. APE16]
ATGAACAAGGTTCAGCAAGGTTTCACCCTGATCGAACTGATGGTGGTGGTTGCTATCATCGGTATCCTGGCCGCAGTTGC
TCTGCCGGCTTACTCCGACTACCAGGCCAAGGGTAAGATCGCCGCCGGTCTGGCAGAAATTTCTGCCGTCCGTACCGCCT
ATGAAATGATCGCCAACGATGGCGGCACCCCGACCGAAGCTACCATCGGGCTTGACACTTCCAAGAGCGGCCACTGTACC
TACACCGTGGACAACACCGGCATCTCCTGCGCCCTGAAGAATGCCCCGACCAAGGTCAATGGTCTGGCTATCAAGCTGGC
CCGGGCTGCCGGTGGTGCCTGGTCCTGCGACGCCAGCGCCCTGCCCACTGACATGAAGCCGAAGGGTTGCAGCTAA
ATGAACAAGGTTCAGCAAGGTTTCACCCTGATCGAACTGATGGTGGTGGTTGCTATCATCGGTATCCTGGCCGCAGTTGC
TCTGCCGGCTTACTCCGACTACCAGGCCAAGGGTAAGATCGCCGCCGGTCTGGCAGAAATTTCTGCCGTCCGTACCGCCT
ATGAAATGATCGCCAACGATGGCGGCACCCCGACCGAAGCTACCATCGGGCTTGACACTTCCAAGAGCGGCCACTGTACC
TACACCGTGGACAACACCGGCATCTCCTGCGCCCTGAAGAATGCCCCGACCAAGGTCAATGGTCTGGCTATCAAGCTGGC
CCGGGCTGCCGGTGGTGCCTGGTCCTGCGACGCCAGCGCCCTGCCCACTGACATGAAGCCGAAGGGTTGCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
45.652 |
100 |
0.481 |
| pilA | Acinetobacter baumannii strain A118 |
44.853 |
100 |
0.466 |
| pilA | Vibrio cholerae strain A1552 |
39.189 |
100 |
0.443 |
| pilA | Vibrio cholerae C6706 |
39.189 |
100 |
0.443 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.189 |
100 |
0.443 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.537 |
100 |
0.435 |
| pilA | Pseudomonas aeruginosa PAK |
37.584 |
100 |
0.427 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
37.681 |
100 |
0.397 |