Detailed information NTG0109000

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ACAM23_RS10055
• Genome accession: NZ_AP031394
• Coordinates: 1916840..1917244 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588007.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16P28
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1911840..1922244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAM23_RS10015 (SPNE16P28_19430)	rnpA	1912261..1912632 (-)	372	WP_000739246.1	ribonuclease P protein component	-
ACAM23_RS10020	-	1912649..1912780 (-)	132	WP_000768903.1	hypothetical protein	-
ACAM23_RS10025 (SPNE16P28_19440)	-	1912781..1913971 (-)	1191	WP_000167759.1	acetate kinase	-
ACAM23_RS10030 (SPNE16P28_19450)	comYH	1914022..1914975 (-)	954	WP_000345123.1	class I SAM-dependent methyltransferase	Machinery gene
ACAM23_RS10035 (SPNE16P28_19460)	-	1915036..1915623 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
ACAM23_RS10040 (SPNE16P28_19470)	comGG/cglG	1915760..1916173 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACAM23_RS10045 (SPNE16P28_19480)	comGF/cglF	1916151..1916612 (-)	462	WP_000250548.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACAM23_RS10050 (SPNE16P28_19490)	comGE/cglE	1916575..1916877 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACAM23_RS10055 (SPNE16P28_19500)	comGD/cglD	1916840..1917244 (-)	405	WP_000588007.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACAM23_RS10060 (SPNE16P28_19510)	comGC/cglC	1917237..1917563 (-)	327	WP_000738624.1	competence type IV pilus major pilin ComGC	Machinery gene
ACAM23_RS10065 (SPNE16P28_19520)	comGB/cglB	1917565..1918581 (-)	1017	WP_073177425.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACAM23_RS10070 (SPNE16P28_19530)	comGA/cglA/cilD	1918529..1919470 (-)	942	WP_000249559.1	competence type IV pilus ATPase ComGA	Machinery gene
ACAM23_RS10075 (SPNE16P28_19540)	-	1919546..1919911 (-)	366	WP_000286415.1	DUF1033 family protein	-
ACAM23_RS10080 (SPNE16P28_19550)	-	1920178..1921433 (+)	1256	WP_088804233.1	ISL3 family transposase	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=109000 ACAM23_RS10055 WP_000588007.1 1916840..1917244(-) (comGD/cglD) [Streptococcus pneumoniae strain 16P28]
MIKAFTMLESLLVLGFVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=109000 ACAM23_RS10055 WP_000588007.1 1916840..1917244(-) (comGD/cglD) [Streptococcus pneumoniae strain 16P28]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTTTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGTCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47