Detailed information NTG1086012

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACJWMD_RS04405
• Genome accession: NZ_CP177182
• Coordinates: 959231..960070 (+)
• Length: 279 a.a.
• NCBI ID: WP_004182435.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD6060
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 954231..965070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMD_RS04375	-	954648..955175 (+)	528	WP_002883896.1	ECF transporter S component	-
ACJWMD_RS04380	-	955198..955713 (+)	516	WP_004182431.1	transcription repressor NadR	-
ACJWMD_RS04385	-	955808..956497 (+)	690	WP_002883906.1	XRE family transcriptional regulator	-
ACJWMD_RS04390	ylqF	956626..957480 (+)	855	WP_004182432.1	ribosome biogenesis GTPase YlqF	-
ACJWMD_RS04395	-	957467..958237 (+)	771	WP_004182433.1	ribonuclease HII	-
ACJWMD_RS04400	-	958244..959164 (+)	921	WP_004182434.1	ROK family protein	-
ACJWMD_RS04405	dprA	959231..960070 (+)	840	WP_004182435.1	DNA-processing protein DprA	Machinery gene
ACJWMD_RS04410	topA	960238..962382 (+)	2145	WP_004182436.1	type I DNA topoisomerase	-
ACJWMD_RS04415	-	962565..963239 (+)	675	WP_004182437.1	ABC transporter ATP-binding protein	-
ACJWMD_RS04420	-	963244..963972 (+)	729	WP_004182438.1	hypothetical protein	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31233.16 Da
• Isoelectric Point: 8.1468

>NTDB_id=1086012 ACJWMD_RS04405 WP_004182435.1 959231..960070(+) (dprA) [Streptococcus salivarius strain MRD6060]
MNNFELFKLKAAGLTNLNILNILDYQKTQDRKLSLRDMAVVSKSKNAVLFMEKYKSLDIKQLKEQFDHFPTLSIFDKEYP
IELKYTYNPPVLLYYQGNLDLLSKPKLAVVGARKCSETGKQSVRKIVSELGNHFTIVSGLACGIDTCAHMEALKNKGNTI
AVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFAIPGNILDGKSDGCHHLIQEGAKCITTGFDILSEFS

Nucleotide

• Length: 840 bp

>NTDB_id=1086012 ACJWMD_RS04405 WP_004182435.1 959231..960070(+) (dprA) [Streptococcus salivarius strain MRD6060]
ATGAATAATTTTGAACTTTTTAAACTTAAAGCCGCTGGGTTGACGAATTTAAATATCTTAAATATTTTGGACTATCAAAA
GACTCAAGATAGAAAATTGAGTTTACGTGATATGGCAGTGGTATCCAAGTCTAAAAATGCCGTTCTTTTTATGGAAAAGT
ATAAGAGTTTAGATATTAAGCAACTCAAAGAACAATTCGACCATTTTCCTACGTTATCGATTTTTGATAAAGAATATCCC
ATTGAGCTGAAGTATACCTATAATCCTCCTGTCCTCCTTTATTATCAGGGGAATCTTGATTTACTGAGTAAACCAAAGCT
AGCTGTTGTTGGGGCAAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTCCGTAAAATTGTTAGTGAACTTGGGAATCACT
TTACTATTGTGAGTGGATTGGCGTGTGGGATTGATACTTGTGCGCATATGGAGGCCTTGAAAAATAAGGGGAACACGATT
GCAGTTATCGGGACAGGACTTGATGTTTATTATCCTAAAGAAAATAAAGCTTTGCAGGACTATATGGCAAAAAATCATTT
AGTTCTTACAGAATATGGACCAGGTGAACAGCCTCTCAAGTACCACTTTCCTGAACGCAATCGGATTATTTCTGGATTGT
GTCAAGGAGTTATGGTTGTAGAAGCTAAGCTTCGCTCAGGAAGTCTGATTACTTGTGAGCGTGCCATGGAAGAAGGTAGA
GATGTTTTTGCTATTCCAGGAAATATTTTAGATGGAAAGTCAGATGGATGCCATCACCTAATTCAGGAGGGTGCAAAGTG
CATTACGACAGGGTTTGACATCCTTTCAGAGTTTTCTTGA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	71.326	100	0.713
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis SK321	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	40.613	93.548	0.38
dprA	Acinetobacter baumannii D1279779	45.575	81.004	0.369
dprA	Acinetobacter baumannii strain A118	45.575	81.004	0.369
dprA	Bacillus subtilis subsp. subtilis str. 168	48.095	75.269	0.362