Detailed information
Bioinformatically predicted
Overview
| Name | pilG | Type | Machinery gene |
| Locus tag | ACFGDV_RS04580 | Genome accession | NZ_CP176528 |
| Coordinates | 947751..948977 (-) | Length | 408 a.a. |
| NCBI ID | WP_136413185.1 | Uniprot ID | - |
| Organism | Noviherbaspirillum sp. ST 5-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 942751..953977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFGDV_RS04550 | - | 942931..943458 (+) | 528 | WP_136413191.1 | hypothetical protein | - |
| ACFGDV_RS04555 | - | 943596..945149 (+) | 1554 | WP_136413190.1 | sigma-54-dependent transcriptional regulator | - |
| ACFGDV_RS04560 | yacG | 945162..945350 (-) | 189 | WP_136413189.1 | DNA gyrase inhibitor YacG | - |
| ACFGDV_RS04565 | zapD | 945359..946114 (-) | 756 | WP_136413188.1 | cell division protein ZapD | - |
| ACFGDV_RS04570 | coaE | 946251..946883 (-) | 633 | WP_136413187.1 | dephospho-CoA kinase | - |
| ACFGDV_RS04575 | pilD | 946885..947751 (-) | 867 | WP_136413186.1 | prepilin peptidase | Machinery gene |
| ACFGDV_RS04580 | pilG | 947751..948977 (-) | 1227 | WP_136413185.1 | type II secretion system F family protein | Machinery gene |
| ACFGDV_RS04585 | pilB | 948991..950721 (-) | 1731 | WP_136413184.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ACFGDV_RS04590 | - | 950874..952145 (-) | 1272 | WP_136413183.1 | HlyC/CorC family transporter | - |
| ACFGDV_RS04595 | - | 952172..952894 (-) | 723 | WP_136413182.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 408 a.a. Molecular weight: 44506.42 Da Isoelectric Point: 10.0027
>NTDB_id=1080712 ACFGDV_RS04580 WP_136413185.1 947751..948977(-) (pilG) [Noviherbaspirillum sp. ST 5-3]
MATAASKSTGAVKESIFVWEGRDKSGKTVKGELRAGSETIVNVTMRKQGILVTKVKKKSFASGRKITDKDITLFTRQLAT
MMKAGVPLLQSFDIVAKGHANPSVAKLVQDIRTDIETGSSLNQAFRKFPLYFDNLFCNLVAAGEQAGILEDLLTRLAIYK
EKTQAIKGKIKSALFYPISILVVAFVVTSVIMIWVIPAFKEVFKSFGADLPAPTLMVMAISDFFVAYWYLIFGGLFASLY
LLFQSWRRSIKVQRFMDKTLLQAPIFGAVIRKATIARWTRTLATMFAAGVPLVESLDSVGGASGNAVYMDATRKIQTEVS
TGTSLTTAMQNSNVFPNMVVQMVSIGEESGALDQMLSKVADFYEAEVDDAVESLSSLMEPLIMVVLGVLIGGMVVAMYLP
IFKLGAVV
MATAASKSTGAVKESIFVWEGRDKSGKTVKGELRAGSETIVNVTMRKQGILVTKVKKKSFASGRKITDKDITLFTRQLAT
MMKAGVPLLQSFDIVAKGHANPSVAKLVQDIRTDIETGSSLNQAFRKFPLYFDNLFCNLVAAGEQAGILEDLLTRLAIYK
EKTQAIKGKIKSALFYPISILVVAFVVTSVIMIWVIPAFKEVFKSFGADLPAPTLMVMAISDFFVAYWYLIFGGLFASLY
LLFQSWRRSIKVQRFMDKTLLQAPIFGAVIRKATIARWTRTLATMFAAGVPLVESLDSVGGASGNAVYMDATRKIQTEVS
TGTSLTTAMQNSNVFPNMVVQMVSIGEESGALDQMLSKVADFYEAEVDDAVESLSSLMEPLIMVVLGVLIGGMVVAMYLP
IFKLGAVV
Nucleotide
Download Length: 1227 bp
>NTDB_id=1080712 ACFGDV_RS04580 WP_136413185.1 947751..948977(-) (pilG) [Noviherbaspirillum sp. ST 5-3]
ATGGCAACTGCCGCCAGCAAATCAACGGGTGCGGTTAAAGAATCAATTTTTGTATGGGAAGGCAGAGACAAGTCGGGGAA
AACCGTCAAAGGCGAACTCCGCGCAGGCAGCGAAACGATCGTCAACGTGACCATGCGCAAACAAGGTATTCTTGTTACCA
AGGTCAAAAAGAAGTCGTTTGCGAGCGGCAGGAAAATTACCGACAAAGACATCACGCTTTTTACGCGGCAATTGGCCACC
ATGATGAAGGCAGGCGTTCCGTTATTGCAGTCGTTCGATATCGTTGCGAAGGGGCACGCCAATCCATCCGTTGCGAAGCT
TGTTCAGGACATCCGCACAGACATCGAAACCGGCAGTAGTCTGAATCAGGCATTTCGCAAGTTTCCCTTATATTTTGATA
ATTTGTTCTGCAATCTGGTGGCCGCCGGCGAGCAAGCCGGTATTCTGGAAGATCTGCTGACTCGTTTGGCAATCTACAAG
GAAAAAACCCAAGCAATCAAAGGCAAAATCAAGTCGGCATTGTTTTATCCGATTTCGATTCTGGTCGTCGCCTTCGTCGT
AACATCGGTAATCATGATCTGGGTGATCCCGGCATTCAAGGAAGTCTTCAAGAGCTTCGGTGCCGACTTGCCAGCACCGA
CATTGATGGTCATGGCCATCTCGGATTTCTTTGTCGCTTACTGGTATCTCATTTTCGGTGGATTGTTTGCCAGCCTTTAT
CTTCTGTTCCAGTCGTGGCGCCGCTCGATCAAGGTTCAACGCTTCATGGACAAGACCTTGCTCCAAGCGCCCATTTTCGG
CGCCGTAATACGCAAGGCAACGATCGCGCGCTGGACGCGGACGCTAGCGACAATGTTTGCCGCGGGCGTGCCGCTAGTTG
AATCGCTGGATTCGGTGGGCGGCGCGTCCGGCAACGCGGTCTATATGGACGCAACCAGAAAGATTCAGACCGAAGTCAGT
ACCGGCACGAGCCTCACTACAGCCATGCAGAACTCCAATGTCTTCCCCAACATGGTTGTACAAATGGTGTCTATTGGCGA
GGAATCGGGCGCGCTCGACCAGATGCTGAGTAAAGTCGCCGATTTCTACGAAGCGGAGGTCGACGACGCGGTCGAATCTC
TATCCAGCCTGATGGAACCGCTGATCATGGTGGTCCTTGGCGTGCTCATCGGCGGCATGGTTGTGGCAATGTATCTCCCG
ATCTTCAAGCTGGGAGCCGTCGTCTGA
ATGGCAACTGCCGCCAGCAAATCAACGGGTGCGGTTAAAGAATCAATTTTTGTATGGGAAGGCAGAGACAAGTCGGGGAA
AACCGTCAAAGGCGAACTCCGCGCAGGCAGCGAAACGATCGTCAACGTGACCATGCGCAAACAAGGTATTCTTGTTACCA
AGGTCAAAAAGAAGTCGTTTGCGAGCGGCAGGAAAATTACCGACAAAGACATCACGCTTTTTACGCGGCAATTGGCCACC
ATGATGAAGGCAGGCGTTCCGTTATTGCAGTCGTTCGATATCGTTGCGAAGGGGCACGCCAATCCATCCGTTGCGAAGCT
TGTTCAGGACATCCGCACAGACATCGAAACCGGCAGTAGTCTGAATCAGGCATTTCGCAAGTTTCCCTTATATTTTGATA
ATTTGTTCTGCAATCTGGTGGCCGCCGGCGAGCAAGCCGGTATTCTGGAAGATCTGCTGACTCGTTTGGCAATCTACAAG
GAAAAAACCCAAGCAATCAAAGGCAAAATCAAGTCGGCATTGTTTTATCCGATTTCGATTCTGGTCGTCGCCTTCGTCGT
AACATCGGTAATCATGATCTGGGTGATCCCGGCATTCAAGGAAGTCTTCAAGAGCTTCGGTGCCGACTTGCCAGCACCGA
CATTGATGGTCATGGCCATCTCGGATTTCTTTGTCGCTTACTGGTATCTCATTTTCGGTGGATTGTTTGCCAGCCTTTAT
CTTCTGTTCCAGTCGTGGCGCCGCTCGATCAAGGTTCAACGCTTCATGGACAAGACCTTGCTCCAAGCGCCCATTTTCGG
CGCCGTAATACGCAAGGCAACGATCGCGCGCTGGACGCGGACGCTAGCGACAATGTTTGCCGCGGGCGTGCCGCTAGTTG
AATCGCTGGATTCGGTGGGCGGCGCGTCCGGCAACGCGGTCTATATGGACGCAACCAGAAAGATTCAGACCGAAGTCAGT
ACCGGCACGAGCCTCACTACAGCCATGCAGAACTCCAATGTCTTCCCCAACATGGTTGTACAAATGGTGTCTATTGGCGA
GGAATCGGGCGCGCTCGACCAGATGCTGAGTAAAGTCGCCGATTTCTACGAAGCGGAGGTCGACGACGCGGTCGAATCTC
TATCCAGCCTGATGGAACCGCTGATCATGGTGGTCCTTGGCGTGCTCATCGGCGGCATGGTTGTGGCAATGTATCTCCCG
ATCTTCAAGCTGGGAGCCGTCGTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilG | Neisseria gonorrhoeae MS11 |
54.034 |
100 |
0.542 |
| pilG | Neisseria meningitidis 44/76-A |
53.79 |
100 |
0.539 |
| pilC | Pseudomonas stutzeri DSM 10701 |
53.616 |
98.284 |
0.527 |
| pilC | Legionella pneumophila strain ERS1305867 |
53.03 |
97.059 |
0.515 |
| pilC | Acinetobacter baumannii D1279779 |
52.393 |
97.304 |
0.51 |
| pilC | Acinetobacter baylyi ADP1 |
50.503 |
97.549 |
0.493 |
| pilC | Vibrio cholerae strain A1552 |
39.655 |
99.51 |
0.395 |
| pilC | Vibrio campbellii strain DS40M4 |
40.05 |
97.304 |
0.39 |
| pilC | Thermus thermophilus HB27 |
35.422 |
100 |
0.36 |