Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ACAM22_RS06145 Genome accession   NZ_AP028929
Coordinates   1361841..1362491 (-) Length   216 a.a.
NCBI ID   WP_265471425.1    Uniprot ID   -
Organism   Streptococcus sp. SN-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1356841..1367491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS06120 (MASAN616_12020) - 1357784..1358164 (-) 381 WP_153226519.1 VOC family protein -
  ACAM22_RS06125 (MASAN616_12030) rplT 1358223..1358582 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  ACAM22_RS06130 (MASAN616_12040) rpmI 1358634..1358834 (-) 201 WP_001125943.1 50S ribosomal protein L35 -
  ACAM22_RS06135 (MASAN616_12050) infC 1358867..1359397 (-) 531 WP_000848180.1 translation initiation factor IF-3 -
  ACAM22_RS06140 (MASAN616_12060) - 1359617..1361857 (-) 2241 Protein_1216 DNA internalization-related competence protein ComEC/Rec2 -
  ACAM22_RS06145 (MASAN616_12070) comEA/celA/cilE 1361841..1362491 (-) 651 WP_265471425.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACAM22_RS06150 (MASAN616_12080) - 1362558..1363127 (-) 570 WP_261050264.1 GNAT family N-acetyltransferase -
  ACAM22_RS06155 (MASAN616_12090) - 1363243..1364217 (-) 975 WP_261050265.1 PhoH family protein -
  ACAM22_RS06160 (MASAN616_12100) - 1364302..1364517 (-) 216 WP_261050267.1 YozE family protein -
  ACAM22_RS06165 (MASAN616_12110) cvfB 1364526..1365380 (-) 855 WP_369606517.1 RNA-binding virulence regulatory protein CvfB -
  ACAM22_RS06170 (MASAN616_12120) frr 1365440..1365997 (-) 558 WP_175913643.1 ribosome recycling factor -
  ACAM22_RS06175 (MASAN616_12130) pyrH 1366006..1366743 (-) 738 WP_000002996.1 UMP kinase -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23176.59 Da        Isoelectric Point: 7.9589

>NTDB_id=107335 ACAM22_RS06145 WP_265471425.1 1361841..1362491(-) (comEA/celA/cilE) [Streptococcus sp. SN-1]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPIKETNLQAEVAAISKDSVSEKEVKKEKNAEPLEQDLITVDVKG
AVKAPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEVASQQTTSGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=107335 ACAM22_RS06145 WP_265471425.1 1361841..1362491(-) (comEA/celA/cilE) [Streptococcus sp. SN-1]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATTGTCATCTGTACTGGTCTGGGGTTACTTGTCGGAGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTATAAAGGAAACGAATTTACAGGCAGAAGTCGCAGCTATTTCCAAGGATT
CGGTGTCCGAAAAGGAAGTGAAGAAGGAAAAAAATGCAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTGAAGGGT
GCTGTTAAAGCGCCAGGAATTTATGATTTGCCAGTAGGGAGTCGGGTCAATGACGCCGTTCAGAAAGCAGGTGGTTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTCAGTGATGAGGCTCTGGTTTACGTTCCAACTAAGGGAG
AAGAAGTAGCTAGTCAACAGACTACTTCGGGGACAGCTTCTTCGACGAGCAAGGAAAAAAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGATCATCGTGAGGCAAATGG
GAAATTTAAGTCGGTTGATGAACTCAAGAAAGTCTCTGGAATTGGTGCCAAGACCATAGAAAAGCTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

94.907

100

0.949

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

94.444

100

0.944

  comEA/celA/cilE Streptococcus pneumoniae D39

93.519

100

0.935

  comEA/celA/cilE Streptococcus pneumoniae R6

93.519

100

0.935

  comEA/celA/cilE Streptococcus pneumoniae Rx1

93.519

100

0.935

  comEA/celA/cilE Streptococcus mitis SK321

90.741

100

0.907

  comEA Lactococcus lactis subsp. cremoris KW2

42.222

100

0.44

  comEA Latilactobacillus sakei subsp. sakei 23K

33.613

100

0.37

  comEA Staphylococcus aureus N315

34.821

100

0.361


Multiple sequence alignment